Shewanella violacea: SVI_1543
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Entry
SVI_1543 CDS
T01206
Name
(GenBank) ABC transporter, ATP-binding/permease protein, putative
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
svo
Shewanella violacea
Pathway
svo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SVI_1543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_1543
Transporters [BR:
svo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SVI_1543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA
AAA_29
AAA_16
Septin
Roc
DUF815
AAA_24
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BAJ01514
UniProt:
D4ZIL5
LinkDB
All DBs
Position
complement(1775607..1777436)
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AA seq
609 aa
AA seq
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MFKRFESWVDPLPAAEPEQPPQGIYAFCRHYTKGFERPLILMSIITAILAILEVSLFGFM
GQLVDLLIANDPDTLFENEGIKLIGMTVLVLVVIPSLVLLHALIVYQGLLGNYPMSIRWL
AHRYLLKQSVSFYQNDFAGRIATKVMQTSLAVRETVTKLLDVLVYILVYFTSMLVMIANA
DLRLMLPMLIWLGLYIGLQFRFLPRLKQVSTEQADARSNMTGRLVDSYTNITTVKLFSHT
QKEAEYAKGSMQTFLDTVYRQMRLVTGINVSVQIINYLLAFAIAAVSIWLWTTSAITVGA
IAIAISLALRLNGMSQWIMWEISSLFENIGTVTDGMNTLSQPTEIQDLKDAPKISVEKGA
IDFTEVSFHYGENSGVIEKLNLKIKAGEKVGLVGRSGAGKSTLVNLLMRFYDVEKGTIEI
DKQNIKHVQQDSLRANIGMVTQDTSLLHRSIRENILYGKPDASEEELKSAIKSAQAYDFI
QSLTDAEGNLGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEVEAA
IQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDEGNIVEEGTHQELINAGGIYAQLWAH
QTGGFLGLD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacgattcgagtcatgggttgaccctctccccgctgcggagcccgagcagcct
cctcaagggatatatgcattttgccgtcattacaccaaaggatttgaacgcccgctgata
ttaatgtccatcattactgccattctagccatattagaggtctcattattcggcttcatg
ggccagcttgtcgacttattgatagccaatgaccctgataccttgtttgaaaatgaaggc
atcaagctgatcggcatgacggtattagtcttagtggtgatcccctcgttagtcctgtta
catgcactcattgtttatcaaggactcctggggaactaccccatgtccatcagatggtta
gcccatagatatttactaaaacagagtgtttctttctatcaaaatgattttgcgggtcgt
atcgccactaaggtgatgcaaacgtctttagcagtcagagaaaccgtgactaaacttttg
gatgtacttgtgtacatcttagtttatttcacctctatgctggttatgatagccaatgca
gatctacgattaatgctacctatgttgatctggttaggcttgtatatcggcctgcagttc
cgatttttacctcgattgaagcaagtatccaccgaacaggccgatgctcgttcaaatatg
actggtcgcctcgtcgacagctataccaatatcaccacagtgaaactgttttcccacacc
cagaaagaagccgaatacgccaaaggcagcatgcagacgtttctggataccgtgtataga
cagatgcgactcgttacaggtatcaatgtcagtgtgcagatcatcaactacctgctcgca
tttgccatagcagccgtgtcaatctggttatggacaacgagtgctattacagtaggcgct
attgccatagccattagcctagccttaaggttgaatggcatgtcccagtggatcatgtgg
gaaataagttccttgttcgagaatataggcacagttaccgacggtatgaacaccttgtca
cagccgaccgagattcaagatttaaaagatgcaccaaaaatcagtgttgaaaaaggcgcc
atcgacttcaccgaagtcagctttcactatggtgagaatagcggtgtcatcgaaaaacta
aacttaaagattaaagccggtgagaaagttgggctagtgggtcgctctggcgctggaaaa
tcaacattagtcaacctcttgatgcgcttctacgatgttgaaaaaggcactatcgaaatc
gacaaacagaatattaaacatgttcaacaagactctctgcgcgccaacataggcatggtc
acccaagatacgtcattgctacacagatctattcgagaaaatattctctatggaaagcct
gatgccagtgaagaggaactaaagagtgcaataaaaagtgcacaagcctatgacttcatc
caaagcctgacggatgcagaagggaatttaggcctagatgctcaagtgggtgaacgaggt
gtcaaactctcaggcggacagagacaacgcatcgccatcgcaagagtgcttctcaagaat
gcacctatcttgctactggatgaggcaacatcggcactagactcggaagtagaagccgcg
atacaagaaagcttataccagcttatggagggaaagactgtgatagccattgcccataga
ctatccaccatagctgcaatggatagattaattgtcttagatgaaggtaatattgttgag
gaaggcacccatcaagaactgataaacgctggcggtatatatgcccaactatgggcgcat
cagactggtggcttcttaggcctagattaa
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