Shewanella violacea: SVI_1544
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Entry
SVI_1544 CDS
T01206
Name
(GenBank) ADA regulatory protein, putative
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
svo
Shewanella violacea
Pathway
svo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SVI_1544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svo03000
]
SVI_1544
03400 DNA repair and recombination proteins [BR:
svo03400
]
SVI_1544
Enzymes [BR:
svo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SVI_1544
Transcription factors [BR:
svo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SVI_1544
DNA repair and recombination proteins [BR:
svo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SVI_1544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
SWIRM
Motif
Other DBs
NCBI-ProteinID:
BAJ01515
UniProt:
D4ZIL6
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All DBs
Position
1777605..1779134
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AA seq
509 aa
AA seq
DB search
MSKLMSKLSNESCRKARLSRDPRFDGKFFIGVLTTGIFCRPICPAVAPKEENVRYFDSAV
SASLAGLRPCLRCRPDSAPNSSAWKGTRTTLERALTLIEAGVLSGNDAIDIEALSARLGI
SSRYLRQVFSDNFGTSPKKYAQFRDLMFAKQLLHQTNLSVTQVAFASGFNSVRRFNESFK
QTLRLTPTALRKTTQKKTQVGKGTDKPELITQGVMLSLFFSYRPPLNWARQLAFYRLRMV
DKMEWDLGGEGYGRSFQLGEAKGYFEVNHLVDKNGFKINIYLASSDHLASLKDITMQIRR
LLDLDADIDKIENLIGATAIMTQGMISGLRLPGTWSVFEAGCRAVLGQQVSIIQASALLN
TLVKAYGENVTISGKKMILFPRPEVIAAASLDELKMPGARKAALKALGLFVSEHPDGAVD
DWLSIKGIGPWTLAYAKMRGLSDPDILLCSDLVVKKKVLSLYQQGVDPVPHDKQTKTLTR
VEYSQLTDMLTEQASPWGSYLTFQLWNLA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcttatgtctaagttatccaatgaatcttgtagaaaagccaggttgtcccgg
gatccgcgattcgacggcaaattttttatcggggttcttactaccggtattttttgtcga
ccaatttgtcctgcagtggctccgaaggaggagaatgttcgttattttgattcagcggtt
agtgcatccttagcagggctaaggccgtgtcttcgttgtcgccctgacagtgccccaaac
tctagtgcctggaaaggtactcgcacgacgttagagcgagcacttaccttgatagaagct
ggtgtgctctctggaaatgatgctatagacatagaggccctatcggctaggttgggcatt
tctagccgttatctcaggcaggtctttagtgacaattttggtacgtctcctaaaaagtat
gctcaatttcgtgatttaatgttcgctaaacagctgctacatcagacaaatttaagcgtc
actcaagttgcgtttgcatcaggatttaacagtgtcaggcgattcaatgaatcatttaaa
caaacgttaagactcacgcctaccgcccttagaaaaacgactcagaagaagactcaagtt
ggaaaggggactgataagcctgaactgataacccaaggtgtgatgctatctctgtttttt
tcctacaggccgcctttgaattgggctcgtcagttggctttttatcggctgcgtatggtt
gacaaaatggagtgggatctcggtggtgagggttatggaagaagcttccagttgggtgag
gcgaaaggatatttcgaggtaaaccatctagtagacaaaaatggctttaagatcaatatt
tatctggcttcgagtgaccatcttgccagtttaaaagatatcaccatgcaaatccgtaga
ttgctagatttggatgctgatattgataagattgaaaaccttataggcgcgaccgccatc
atgacccaaggtatgattagcggcctaaggttacctggcacttggtctgtttttgaagcg
ggctgccgtgccgttctcggtcagcaggtgagcatcattcaagctagcgcactgttaaat
acactggttaaagcttatggtgaaaatgtcacgatttccggtaagaaaatgatacttttc
cctaggcctgaagtcattgctgcagcgtctctggatgagcttaaaatgccgggagcgcgg
aaagcagcactgaaagctctgggattatttgtcagtgagcatcctgacggtgctgtcgat
gactggctatctattaaaggcataggtccatggacgttagcctatgccaagatgcgcggc
ctaagcgatcctgatatcttattgtgttccgatctagtggttaagaaaaaggtattatct
ctgtatcaacaaggcgtagaccccgttccccatgataagcaaacaaagacgttaacccga
gtagagtatagtcagctaacagatatgctcaccgagcaagcttcaccctggggaagttac
ttaacgtttcaattatggaacctagcatga
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