Shewanella violacea: SVI_1709
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Entry
SVI_1709 CDS
T01206
Name
(GenBank) proline racemase
KO
K12658
4-hydroxyproline epimerase [EC:
5.1.1.8
]
Organism
svo
Shewanella violacea
Pathway
svo00470
D-Amino acid metabolism
svo01100
Metabolic pathways
Module
svo_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SVI_1709
Enzymes [BR:
svo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.8 4-hydroxyproline epimerase
SVI_1709
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GFIT
Motif
Pfam:
Pro_racemase
PhzC-PhzF
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAJ01680
UniProt:
D4ZJ31
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Position
complement(1951902..1952903)
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AA seq
333 aa
AA seq
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MLKGTYFCVDAHTCGNPVRLVTSGHPDLKGRTMSEKRQHFLKEYDWIRKGLMFEPRGHDM
MSGAFLYPPCSDNADASILFIETSGCLPMCGHGTIGTITAAIESGLLTAKEPGKLVIDVP
AGQIRIEYKQTGEKVDWVKIYNVPAYLAHQDVILDIPELGTLKIDVSYGGNYYVIVEPQA
NFPGLREWTAADILRWSPIVRQIAHEQLTCVHPDDPTVSGITHVLWTGETISEGSDGANA
VFYGDKAIDRSPCGTGTSARLAQLYAKGTLNVGDKYTHESIIGSQFIGCIESATLVGEHK
GIMPSIQGWARITGQNSITIDDSDPYAFGFQVT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaggcacttacttttgcgtcgatgctcatacatgcggaaatcctgtacgcttg
gtcaccagtggccatccggatctcaagggccgcactatgagtgagaagcgccagcacttt
ctcaaagaatatgattggatccgtaaaggattaatgttcgaaccaagaggccacgatatg
atgtcgggggcttttttgtatccgccatgcagtgacaacgccgacgcatcaatcttgttt
atcgaaaccagtggctgcctgcccatgtgtggacacggcaccataggtaccatcacagcg
gctatcgaatcaggcctgttgacggccaaagagccaggtaaactcgttatagatgtacct
gcgggccagatccgtatcgaatataagcagacaggagaaaaagtcgattgggtcaagatc
tacaacgtcccagcttaccttgctcatcaagatgttatcttagatatcccggaacttggc
accctaaaaatagatgtatcttatggcggtaactattatgtcatcgtcgagccccaagcc
aacttccccggattaagagagtggaccgctgccgatattctcaggtggagccctatcgtc
cgccagattgcccatgagcagttaacctgtgtgcatcctgatgacccaacagtatctggt
atcacccatgttctctggaccggcgaaacgatcagtgaaggatccgatggtgccaatgca
gtattttatggcgacaaggccatagaccgctctccttgcgggacaggtaccagcgctcgc
ttggctcagttatatgccaagggaacgttaaacgttggcgataaatacacccatgaaagc
atcataggcagtcaatttatcggctgcatcgaatcagccactcttgttggtgaacacaag
gggatcatgccgagtattcaaggctgggccagaatcaccggccaaaactcaataaccata
gatgacagtgacccatacgcctttggctttcaagttacttaa
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