Shewanella violacea: SVI_1824
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Entry
SVI_1824 CDS
T01206
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
svo
Shewanella violacea
Pathway
svo00020
Citrate cycle (TCA cycle)
svo00480
Glutathione metabolism
svo00720
Other carbon fixation pathways
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
svo01120
Microbial metabolism in diverse environments
svo01200
Carbon metabolism
svo01210
2-Oxocarboxylic acid metabolism
svo01230
Biosynthesis of amino acids
svo04146
Peroxisome
Module
svo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
svo_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SVI_1824 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
SVI_1824 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SVI_1824 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SVI_1824 (icd)
Enzymes [BR:
svo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SVI_1824 (icd)
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
BAJ01795
UniProt:
D4ZJE6
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All DBs
Position
2098052..2100277
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AA seq
741 aa
AA seq
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MTDKSSTIIYTETDEAPALATLSLLPIIKTFTQAAGINVETRDISLSGRIISLFPEQLSD
SQKIADALAELGELAGKPEANIIKLPNISASVPQLKACILELQQKGYDIPSYPDEPTNAA
EEDVKARYDKIKGSAVNPVLREGNSDRRAPGSVKKYAQKHPHSMGAWSKDSKTHVAHMNE
GDFYGSEKSVTLTEATQVSIVLKTKEGGEQVLKTALPLKAGEVIDASVMSKQALLAFFER
ETQDAKAQGVLLSLHLKATMMKVSDPILFGHAVKVYYKELFAKHSSLFEELGVDVNNGLG
DVYAKISTLPAEQKAAIEADIAAIYLTRPELAMVDSDKGITNLHVPSDVIIDASMPAAIR
TSGMMWGPDGQPQDTKAMIPDRCYAGVYQETIQFCKENGAFDPTTMGSVPNVGLMAQKAE
EYGSHDKTFEISASGSMNVIDANGNTLLSHDVEAGDIWRMCQVKDAPIQDWVKLAVKRAR
LSNTPAVFWLDEQRAHDAEIIKKVNQYLKDHDTKGLDIRILSPIDATRFTLQRTKDGLNT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTTDNAKAQVLADTLDVAIGQFLDENKSPSRRVGQLDNRG
SHFYLAMYWAQAVVAQSQDAELKAQFAELARALASNEDKIVAELNSAQGAPVDLGGYYRL
DPVKAAAEMRPSATLNALFTA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaatcatcaacaattatttatactgaaacagacgaagcccccgcgttagcg
accctgtctctgttacctattatcaagacgtttactcaagcggctggtatcaatgttgaa
acccgtgacatctcattatcgggtcgcatcatttcactatttccagaacaactgagtgat
tcacaaaaaattgccgatgcactggctgaactgggtgaacttgcgggtaagcccgaagcc
aacatcattaagcttcccaatatcagtgcctcagtgccgcagctaaaagcctgtattcta
gagcttcaacagaaaggctatgatattccttcatatcccgatgagccgactaatgcagca
gaggaagatgttaaagcccgttacgataagattaaaggcagcgccgtcaacccagtacta
cgtgaaggtaactctgatcgtcgtgcgccaggctcagttaaaaaatatgctcagaagcat
ccgcactctatgggagcttggtctaaagactctaagactcacgtagcacatatgaatgag
ggtgacttctacggcagtgaaaaatcagtcactctgacagaggcaactcaagtcagtatc
gtccttaagacgaaagagggtggtgagcaggtacttaagactgcacttcctttgaaagcg
ggcgaagtgatcgatgcttcagtgatgagtaaacaggcattactcgcgtttttcgagcgt
gagactcaagatgctaaagcccaaggcgtgctactttctttgcatttgaaagctaccatg
atgaaagtatcggatcctatcctcttcggtcatgcggttaaggtctactacaaggaattg
tttgctaagcattcaagcctatttgaagagctgggtgtcgatgtgaacaatggtctgggt
gacgtatacgccaagataagcacattaccagcggagcaaaaagccgcgatagaagccgac
atagcggccatctatctgactcgccctgaactggctatggtggattcagataagggtatc
actaacttgcatgtgcctagtgatgtgatcatagatgcgtctatgcctgctgccattcgc
acctcaggtatgatgtggggacctgatggtcagcctcaagatactaaggctatgatcccg
gatcgttgctatgccggtgtatatcaggaaactatccaattctgtaaagaaaatggtgcc
ttcgatccaaccacaatgggcagtgtgccaaatgtgggcttgatggctcagaaagccgaa
gagtatggtagccacgataaaacattcgaaatttctgcatcaggcagcatgaatgttatc
gatgctaacggaaacacgcttctttcccatgatgtagaagcgggtgatatctggagaatg
tgtcaggttaaagacgcgcctattcaggattgggttaaattagcagtcaagcgtgcacgt
ttatcgaatacaccggcggtattctggttagatgagcaacgtgcacacgatgctgaaatc
attaagaaagtgaatcagtatcttaaagatcacgacaccaagggtctggatattcgtatc
ttgtctcctatagatgccacacgtttcaccctgcaacgcacaaaagatggcttaaatact
atttctgtcacgggtaacgttctgcgtgattacctaacggatctgttccccattcttgag
ttgggtaccagtgctaagatgctctctatcgttcctttgatgaatggtggtggtctgttt
gagactggtgcgggcggaagtgcgcctaagcatgtacaacaggttgaaaaggaaggccac
ctgcgttgggattcattaggtgagtttctggctttggctgcatccttagagcatctgagt
cagactactgacaatgctaaggcgcaggtattggctgatacactggatgtggctatcgga
cagtttctcgatgaaaacaagtcaccttctcgtcgagtaggccagttagataaccgcggc
agtcatttctatcttgccatgtattgggctcaggctgtcgttgctcagtcacaagatgct
gaacttaaggcgcagtttgctgaactagcgagagccttggctagcaatgaagacaagatt
gttgctgagttaaattcggcccaaggtgctccagtcgatctaggaggatactatcgttta
gatcctgttaaggctgctgccgagatgcgtccaagcgcgactctaaatgccttgtttact
gcttag
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