Shewanella violacea: SVI_1929
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Entry
SVI_1929 CDS
T01206
Name
(GenBank) polysaccharide biosynthesis protein
KO
K19715
8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:
2.6.1.109
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
svo01005
]
SVI_1929
Enzymes [BR:
svo01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.109 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase
SVI_1929
Lipopolysaccharide biosynthesis proteins [BR:
svo01005
]
Lipid A
SVI_1929
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Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BAJ01900
UniProt:
D4ZJQ1
LinkDB
All DBs
Position
complement(2215389..2216573)
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AA seq
394 aa
AA seq
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MPGFELFGPEEKQEVADVMENGFTFRYNFDHMRNDRWKTREMEQLLCEKMNVKHAHLLSS
GTAALQTALAAAGIGAGDEVIVPPFTFVASVEAVFMAGAIPVFAEIDETLCLSPEGIEAA
ITPRTKAVNLVHMCGSMGKMDEIKAVCEKHDLVLLEDACQAIGGTYKGQALGTIGDVGCY
SFDSVKTITCGEGGAVITNSDTIYNHTHMFSDHGHDHVGNDRGAEDHPIMGLNFRISELN
SAMGLAQLRKLDTIIEIQRKHKKIIKDAISDIAEVTFRELPDAEGDSAGFLTFMMPTEER
TIEINKKLAENGVDGCFYWYINNWHYLNNWKHIQELKSCSALPITLIDDRPDYTKVLVPK
SDAIMSKTISMLIKLSWTEEEIAQRIENIKKAFA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcccggttttgaattatttggtcctgaagagaagcaagaagttgcagacgtaatggag
aacggttttaccttccgttataactttgatcatatgcgtaatgaccgctggaaaacgcgt
gagatggagcagttgctttgtgaaaaaatgaatgtgaagcacgctcaccttctttcaagc
ggtacagcagcgctccaaacagccctagcagcggctggtattggtgcaggcgatgaggtt
atcgtgcctccgtttacattcgtagcttctgtagaagcggtatttatggctggtgctatc
ccggtatttgccgagatagatgagacgctttgtctctctcctgaaggcatcgaagcggcg
atcactccgcgaactaaagcagttaacttagttcacatgtgtggttctatgggtaagatg
gatgaaattaaagccgtctgtgaaaagcatgatcttgttctgctagaagatgcttgtcag
gctatcggtggcacgtacaagggtcaggcccttggcactatcggtgatgtaggttgttac
tctttcgattcggttaaaaccatcacctgtggtgaaggcggagccgttatcactaacagt
gacaccatctacaatcacactcacatgttctcggatcatggccacgaccatgtaggcaac
gaccgcggcgctgaagaccatccaatcatgggtctcaatttccgtatctctgagctgaat
tcagccatgggcctagcgcaattgcgtaagcttgataccatcatagagatccaacgtaag
cataagaagatcatcaaggatgccattagcgatatcgctgaagtgactttccgtgaactt
cccgatgcagagggtgactcagctggcttcctaacctttatgatgccaacagaagagcgc
accatagagatcaacaagaagttagccgaaaatggtgtagacggttgtttctactggtat
atcaacaactggcactacctgaacaattggaagcacattcaagagcttaaatcttgctct
gccctgccgatcacattaattgacgaccgtcctgactatactaaagtcttggtacctaag
tctgatgccatcatgagcaagaccatctctatgttgattaaactctcctggaccgaagaa
gagattgctcaacgtatcgagaacattaagaaagcctttgcttaa
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