Shewanella violacea: SVI_1933
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Entry
SVI_1933 CDS
T01206
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
svo
Shewanella violacea
Pathway
svo00300
Lysine biosynthesis
svo01100
Metabolic pathways
svo01120
Microbial metabolism in diverse environments
svo01230
Biosynthesis of amino acids
Module
svo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SVI_1933 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svo01002
]
SVI_1933 (dapE)
Enzymes [BR:
svo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SVI_1933 (dapE)
Peptidases and inhibitors [BR:
svo01002
]
Metallo peptidases
Family M20
SVI_1933 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BAJ01904
UniProt:
D4ZJQ5
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All DBs
Position
complement(2219370..2220500)
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AA seq
376 aa
AA seq
DB search
MSQDVLTLAQDLISRPSVTPLDEGCQQLMADRLAKAGFDIEPMVFEDTTNMWARRGTEKP
LFCFAGHTDVVPVGDLNRWHTPPFEPVVIDGYLHGRGAADMKGSLAAMLVATERFVEKNP
DHKGSIAFLITSDEEGPFINGTTRVIDTLEARDEKITWSLVGEPSSTHKLGDIVKNGRRG
SLTGNLTVNGIQGHVAYPHLADNPIHKAMPALDELAKMHWDKGNEYFPPTSFQIANINGG
TGASNVIPGALEVMFNFRYSTEVTADILIQRVLNILDAHGLEYDISWVYNGLPFLTGDGP
LLDATREAIKQVTGTDTDPQTTGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKVDDI
EQLALCYEVILEKLLC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggatgtattaaccctagcgcaagatcttatctctcgcccctcagtcacacca
ctagacgaaggctgtcagcagttaatggccgacaggttagctaaagcaggcttcgatatt
gagcctatggtgtttgaagataccaccaacatgtgggccagacgcggcactgaaaagccg
ctattttgcttcgctggccataccgatgtggtgccagtgggcgatctcaatcgctggcac
acaccgcccttcgagcctgtggttatcgatggctatctccacggacgcggcgccgccgat
atgaagggctcactggccgccatgttggtcgcgaccgaacgcttcgtcgagaaaaacccg
gatcataaaggctccatcgccttcttgatcaccagtgacgaagagggacctttcatcaac
ggtaccactcgcgtcatcgacaccttagaggcccgagatgagaagataacttggtctctg
gtcggtgagccgtcttcgactcataaactcggtgatatcgtcaaaaatggtcgccgaggc
agcctcacgggtaacttaaccgtcaatggcattcagggccatgtggcctaccctcacctt
gcggacaatcctatccataaggcgatgccggctttagatgaattggccaagatgcattgg
gacaagggcaatgaatatttcccgcccaccagcttccagatagccaatatcaatggcggt
acaggtgcatcgaatgtgatccctggggcattagaagttatgtttaacttccgatattcc
accgaggtcaccgccgatattcttatccaacgtgtgctcaatatcttagatgcccatgga
ttagaatacgatatcagctgggtctacaacggcctgccatttctcaccggtgacgggcct
ctgctggacgcgaccagagaagccatcaagcaagtcactggcacagatacagatccacaa
accacaggtggtacatctgatggacgctttatcgcgccaaccggcgcacaagtcatagaa
ctgggtccagttaatgccactattcacaaagtgaatgagtgcgtaaaagtggatgatatc
gaacaactagcactttgctatgaagttatattggaaaaattactttgctaa
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