Shewanella violacea: SVI_1955
Help
Entry
SVI_1955 CDS
T01206
Name
(GenBank) AraC-type DNA-binding domain-containing protein
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svo03000
]
SVI_1955
Transcription factors [BR:
svo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SVI_1955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BAJ01926
UniProt:
D4ZJS7
LinkDB
All DBs
Position
complement(2242267..2243049)
Genome browser
AA seq
260 aa
AA seq
DB search
MSPDALFPEFDSDQYPQKVVSLKLRGGDRECETPFHQHRKGQLVLATHGHVTCKIDDGIW
MVPTHCAVWIPSQVPHSNRISPDAQICMLFIDPKIPNLPQKSCTLSISPLVRELILHLTT
QIQDYKAQSATAKLVDVLMHELVKMPREQFDFPIPKEPRLNKIAQDLLANPDNRETIAQW
AAKFAMSERTLARLVKQEVGVTFGRWRGQLHIVIALRELSSGYSVQRVSEDLGYESVSAF
ITFFKKTLGRPPKQYINGNT
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccagatgcattattccccgaattcgactcggaccaataccctcaaaaagtagtc
tctttgaagctaagaggcggagacagggaatgcgagacccccttccaccaacacaggaag
ggacaattagtgctggcgactcatggtcatgtgacctgtaagatcgacgatgggatctgg
atggtgccgactcactgcgcggtgtggatcccaagtcaggttccccacagcaatagaata
tcgccggatgcacagatctgtatgctatttatcgatcccaaaattcctaacttgccacaa
aagagctgtaccctgtccatctctcccctggtaagggagttgatcttgcacttaacgaca
cagatacaagactataaagcccagagtgccacggctaaacttgtcgacgtactgatgcat
gagctagtcaagatgccaagggagcaatttgactttcccattccaaaagagccaagactg
aataagatcgcccaagacttactcgccaacccagataaccgggagaccattgctcagtgg
gcggcaaaatttgccatgagtgagaggacattggcacggctggtgaaacaagaagtcggg
gtcacatttggtcgctggcgcggtcaattgcatattgttatcgccctgcgcgagctatca
tcaggatattcggtgcaaagggtatctgaagatttgggctatgagtccgtcagcgccttt
atcactttttttaagaagaccttaggccgaccgccgaagcaatatatcaatggcaatacc
tag
DBGET
integrated database retrieval system
