Shewanella violacea: SVI_1963
Help
Entry
SVI_1963 CDS
T01206
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_1963
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_1963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BAJ01934
UniProt:
D4ZJT5
LinkDB
All DBs
Position
complement(2266110..2268230)
Genome browser
AA seq
706 aa
AA seq
DB search
MQKLGVVMFKTNKISLSILASLVSISVQAHDHGHDDIEVISVMGVTHPAPNNSSVMKMDV
SQLDTAGTVAVYNSELMEAQSSQSLGDVLKNDASISAGNTRRGRERFYMRGFVLEPDQSY
LRDGQFHLSRYSQPIELYDRIEVLKGTGALLYGKSTPAGLINLVTKKADTEEFEFSIQQE
FGSFGHAKSTLDISGALNESGTLRARSILSKSSKEGWRKYKDGSKAESDRFVGALMLEAD
LSDDTSVTFNYDRTDDDSQLDMGALHLKNKDTKKYELVGKRGYIWDMPWSKRESNVENIG
FTLNSDLNDDWSINTGINQQTHERTTLESMYGRVQGTDLVKNEYSLRGRETFEQFDVTTG
FFDLKGEFETGSINHRLVIGTNMVDYSRTGKQMTVDFADKVSWDDRTIIDRPDSLDYRNG
KDMLEVKRKSYGVYLQDQIEINDQWHIIAGVRFDREETDASTQNNILPKLGLIYHPTANT
SVYATYSESFEPKDPVMNSDDINYGKKLDAERGESYEIGAKGEFLDGALYLSTALFSIEQ
NNKVITATSSHNPPVTTQAGAVRHRGIEFTAEGQLTDDLSLLTSMMYLDAKVIQDPRFAG
KRSKDVPKFSASTWLNYSITDNTQVSAGAVYVGERYGESANEFLKDAYVKVDLGFSHTMS
FAKDHDAVVRLTVDNLFDVDYLRGGCTNNANFGDGRAIKASIQYRF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaaactcggagttgtaatgtttaaaaccaacaaaatatccctctcaattctggcc
tctttggtctctatctcagtacaagctcacgaccatggccatgatgatatcgaagtcatt
agcgtcatgggcgtaactcatccagcgccaaacaacagctcagtaatgaagatggatgtg
agccagctagacaccgccggaaccgttgcagtttacaattcagagctaatggaagcccaa
agctcacagtctttaggtgatgtattaaaaaatgatgccagcatctcagcaggcaacacc
cgacgtggccgcgaacgcttttatatgcgcggcttcgtattagaaccagatcaaagctac
ctgcgtgacggtcagttccatctatctcgttattcacagcccatagaactctacgaccgt
attgaagtgctcaaaggcactggtgccctactctatgggaaatcaacgcctgcaggcctg
attaacctagtgactaagaaagcagacacagaagagttcgagtttagcattcagcaggaa
tttggctccttcggacatgccaaatcgacactagatattagcggcgcattgaatgagagt
ggcacactaagggccagaagcatcttgtctaaatcttctaaggaaggatggcgcaagtac
aaagacggatctaaggctgagtctgatcgctttgtcggcgcattaatgcttgaggcagac
ctaagcgatgacaccagtgtcacgtttaactatgaccggacagacgatgacagccagtta
gacatgggcgctcttcatctcaagaataaagacactaaaaaatatgagctcgttggcaaa
cgtggctacatctgggatatgccatggtctaagcgtgaatcaaacgttgaaaacatcgga
ttcacactaaactcagatctcaatgatgattggtccatcaatacaggcatcaatcaacaa
actcacgagcgcactaccctagaaagtatgtatggcagagtgcaaggcacagatttagtc
aaaaacgaatactcgctacgcggtagagagactttcgagcagttcgatgtaacaaccggt
ttcttcgatcttaagggtgaatttgagaccggaagcatcaaccacagactagtgattggc
actaacatggtggactactcacgaacaggcaaacagatgacagttgatttcgccgacaag
gttagctgggatgaccgcaccatcatcgacaggcctgatagcttggattaccgcaatggc
aaagacatgcttgaagttaagcgcaaatcatatggcgtttatctacaagaccagatcgag
atcaacgaccagtggcatatcatagctggtgttcgattcgatagagaggaaacggacgca
tcaacgcaaaacaacatattgcctaagctgggcctcatctatcaccccacagctaacacc
tctgtctatgccacctatagcgagagctttgaacctaaagatcctgtcatgaactcagat
gatatcaactacggcaagaagctcgacgccgaacgtggtgaatcatacgagattggtgcc
aaaggtgaattcctagacggcgctttgtatctatcgaccgcactatttagcattgaacaa
aacaacaaggtgattacagccacaagctcgcataacccacctgtcacgactcaagcgggg
gctgttcgtcacagaggtatagagttcacggcagaaggccaattaactgatgatctatct
ctgctgacttctatgatgtatctcgacgccaaggtgattcaagaccctcgctttgccgga
aagcgatcaaaagatgtacctaagttctcagcaagcacatggttgaactacagcatcaca
gataacactcaggtatcagctggtgccgtatacgtaggtgagcgctatggtgaatcagct
aacgagttcctgaaagacgcatacgtaaaagttgatttaggtttcagccatacaatgagc
tttgccaaggatcatgatgctgtcgtaagactgacagtagacaacctatttgatgttgat
tacctcaggggtggatgcaccaacaacgccaactttggcgatggccgtgccattaaggca
tctattcaatatagattctaa
DBGET
integrated database retrieval system
