Shewanella violacea: SVI_1981
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Entry
SVI_1981 CDS
T01206
Name
(GenBank) ribosomal RNA small subunit methyltransferase B, putative
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svo03009
]
SVI_1981
Enzymes [BR:
svo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
SVI_1981
Ribosome biogenesis [BR:
svo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SVI_1981
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
FtsJ
Methyltransf_25
MTS
GCD14
TRM5-TYW2_MTfase
Methyltransf_4
Methyltr_RsmF_N
Methyltransf_15
PrmA
Methyltransf_32
NSUN5_fdxn-like
Motif
Other DBs
NCBI-ProteinID:
BAJ01952
UniProt:
D4ZJV3
LinkDB
All DBs
Position
2282600..2283757
Genome browser
AA seq
385 aa
AA seq
DB search
MVLSEGKPLDRAYSHHFSGLQLAPSEQARITVVAGDILRKLNLYCYLSDVKSEEMSRMGT
RLLNVWHMFHELELPKMQYALQMDEREYFDRLEKAKVQPALWDGCPEWLDTMGQAQLGDA
WAKERAALSTQPKRYLRVNLLKCTREDLGKKLRNEQVQTKEVEGVDTALEVTSDSALFRT
ESFKKGWFEQQDAGSQLVAAAVDAKPGMRVVDACAGAGGKTLSIAAQMQGKGRLLAMDVE
QWKLDSLKQRARRANAHNVETRIIASSKTIKRLKLSADRVLLDVPCSGLGVLKRNPDAKW
RDTPERLPVLVALQKHILQSYSRMVKVGGILIYATCSIMPEENRDQIDAFLAENDHFKLI
EDENISVADSGFDGFYLAKLERISE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtcttatctgaaggtaaacctttagacagagcttactctcatcatttctctggttta
caattagcaccgtctgagcaggctcgtatcactgtggtcgccggagatatcctacgtaaa
ttaaacctttactgttatctttccgatgtgaaatctgaagagatgtcacgtatgggtact
cgcttactcaacgtatggcacatgttccatgaacttgaactgcctaagatgcaatatgca
ttacagatggatgagagagaatattttgaccgtttggagaaggccaaggttcagccagcg
ttatgggacggttgtcctgaatggttagataccatgggtcaggctcagctcggtgatgct
tgggcgaaagaaagagcggcattaagtacgcaacctaagcgttatttacgagtaaatctt
cttaagtgtactcgtgaagacttaggcaagaagctgagaaatgagcaagttcaaacaaaa
gaagtcgaaggtgtcgatacagcactggaagtcacttcggattcggcactatttcgtacc
gagagtttcaagaagggttggttcgagcaacaagatgccggctcacaactggtggcagcg
gcagtagatgctaagccgggtatgcgggttgttgatgcctgtgccggtgctggtggtaag
actttgtccatcgcggctcagatgcagggcaagggacgtttactggccatggatgttgag
cagtggaaattagacagtttgaaacagcgtgctcgccgcgccaacgcacacaatgtagag
actcgtatcattgccagctctaagaccatcaagcgtcttaaactcagcgccgaccgtgtg
ctgctggatgtgccatgttcaggtcttggggtacttaaacgtaatccagatgctaagtgg
cgcgatacgccagaacgtttacctgtcttggtcgcgctgcagaaacatatcctgcagagc
tatagccgtatggtgaaagtgggtggcatcttaatctacgccacttgctctattatgccc
gaagagaaccgtgatcagattgatgcattcctggctgaaaatgatcatttcaaattaatc
gaagatgagaacatcagcgttgctgattcaggattcgatggtttctatttggctaagtta
gaacgtatctctgagtaa
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