Shewanella violacea: SVI_2013
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Entry
SVI_2013 CDS
T01206
Symbol
asnS
Name
(GenBank) asparaginyl-tRNA synthetase
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
svo
Shewanella violacea
Pathway
svo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SVI_2013 (asnS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svo01007
]
SVI_2013 (asnS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_2013 (asnS)
Enzymes [BR:
svo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
SVI_2013 (asnS)
Amino acid related enzymes [BR:
svo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SVI_2013 (asnS)
Transfer RNA biogenesis [BR:
svo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SVI_2013 (asnS)
Prokaryotic type
SVI_2013 (asnS)
SSDB
Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Thiaminase_I-like_N
CDC48_2
NNH1
Motif
Other DBs
NCBI-ProteinID:
BAJ01984
UniProt:
D4ZJY5
LinkDB
All DBs
Position
complement(2315303..2316703)
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AA seq
466 aa
AA seq
DB search
MSITSVASVFKGEFAVGSQITVRGWVRSRRDSKAGISFLAVYDGSCFDPIQGVVPNSLEN
YNNEILKLTAGCSVIMTGEVVESPGKGQAFELQVTSIEVAGWVEDPDTYPMAAKRHSIEH
LRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFQVS
TLDMENLPRTDEGKVDYSEDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNT
SRHLAEFWMVEPEVAFADLDDVAALAEQMLKFCFKAVLEERRDDLEFFAQRVDKTVIERL
ESFVTSDFAQVDYTEAVEILKNCGKKFEYAVEWGIDLQSEHERYLAEEHFKAPVVVKNYP
KDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDARLEEMNLSKEDYWWY
RDMRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPKSASF
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagcattacatctgtcgcttctgtatttaaaggtgagtttgcggttggttcgcagatc
accgttcgcggttgggtaagatcgcgccgagattccaaggccggtatctcttttcttgcc
gtctatgatggctcctgttttgatcctatccaaggtgtagtgcctaatagcttagaaaat
tacaataacgaaatcttaaagttgactgcaggttgttcagtcatcatgacaggtgaagtg
gttgagtctccgggtaaaggtcaggcatttgaactgcaagtcaccagtattgaagtcgct
ggttgggtagaagatcctgacacttatcctatggcggctaagcgtcactctatcgagcat
ttgagagagctagcacaccttcgcccgcgcacaaacattatcggtgcggttgcacgtgta
cgtaactgtttgtcacaagcgatacacaggttctaccacgaagaaggctttatttgggta
tcgacccccctcatcacagcatcggattgtgaaggtgcaggtgagatgttccaagtctcg
actttagacatggaaaacttacctcgtaccgacgaaggtaaagtcgactacagtgaagac
ttcttcggcaaagaggccttcctcacagtatccggtcagctgaatgccgagacttatgcc
tgtgcattgtcaaaagtctatacttttggcccaacattccgtgctgaaaactcaaacacc
agtcgccatcttgccgaattctggatggttgagcctgaagttgctttcgccgatctcgat
gatgtagctgccctcgccgaacagatgctaaaattctgtttcaaagccgtactggaagaa
cgtcgtgacgaccttgagtttttcgcccaacgtgtcgataaaacagtcattgaacgtctt
gaatctttcgttactagcgactttgctcaagttgattacactgaagcggtagaaatcctg
aaaaactgcggtaagaaatttgagtatgccgtcgagtggggaatcgatctgcaatctgag
cacgagagatacctggcggaagagcatttcaaggctcctgtggtcgtgaaaaactacccg
aaagacatcaaggccttctacatgcgtctcaacgatgatggcaagaccgtcgccgcgatg
gacgtactcgcacctgggatcggtgagataatcggtggcgctcaacgtgaagaacgtttg
gacgtactcgatgctcgtctcgaagagatgaacctgagtaaggaagattactggtggtat
cgtgacatgcgccgctacggtacagtgcctcacgcaggtttcggtcttggcttcgagcgt
ttagtctcttacgtcactggcgtatccaacatacgcgatgttatcccattccctcgcgca
cctaagtcggcaagcttctaa
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