Shewanella violacea: SVI_2151
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Entry
SVI_2151 CDS
T01206
Name
(GenBank) RNA methyltransferase, TrmH family, group 1
KO
K02533
tRNA/rRNA methyltransferase [EC:2.1.1.-]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_2151
Transfer RNA biogenesis [BR:
svo03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SVI_2151
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
LasT_C
Motif
Other DBs
NCBI-ProteinID:
BAJ02122
UniProt:
D4ZKC3
LinkDB
All DBs
Position
complement(2484710..2485402)
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AA seq
230 aa
AA seq
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MSLVFVLVEPTRAANVGAAARAIKTMGFEQLILVNSSLHLEKEAHWVAHGATDILERTLV
VDSVADIRAQYDQLIATTARERGTPRQYLTPDELKGTLIEQSDSVKKIALLFGRESSGLS
NSELELCDVFSYVPLINDYPSLNLAQAVMVYSYALSEVNNRLKQKQIQPQEGQLQALKNR
TQLLLQELGTQDDVKLSRWLLDGMSLLGDRDCKMAHQLLNDIGRKLNTDK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgttttcgtactcgtagaacccacacgagccgccaatgtcggtgctgccgcc
agggcaattaaaaccatgggctttgaacagcttattttagttaattcgagtctacatctc
gaaaaagaagcccattgggtcgcccatggcgccacagatattttggaacgtactttagtc
gtcgactcagttgcagatatacgagcacaatatgatcagcttatagcaactacagcgaga
gagagagggactcccaggcagtacttaacacctgacgagctaaaaggcaccttaatagaa
caatcagattcggtaaagaagatagccctgctcttcggtcgcgagtccagcggcttgtct
aacagtgagctagaattatgcgatgtattctcctatgtgccactgattaacgactatcct
tctctcaaccttgcccaggctgtcatggtatatagctatgccttgagtgaggtcaacaat
cgtcttaaacagaaacaaatccagccccaagagggacaacttcaagcgttgaaaaacaga
acccaactcttgttacaagagctaggtacccaagatgatgtaaaactgtcgcgctggtta
ctcgatggcatgagtttgctcggtgacagagactgtaagatggctcatcagctgctcaat
gatatcggtaggaaactcaataccgacaaatga
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