Shewanella violacea: SVI_2156
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Entry
SVI_2156 CDS
T01206
Symbol
gapA-3
Name
(GenBank) glyceraldehyde 3-phosphate dehydrogenase
KO
K00134
glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:
1.2.1.12
]
Organism
svo
Shewanella violacea
Pathway
svo00010
Glycolysis / Gluconeogenesis
svo00710
Carbon fixation by Calvin cycle
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
svo01120
Microbial metabolism in diverse environments
svo01200
Carbon metabolism
svo01230
Biosynthesis of amino acids
Module
svo_M00002
Glycolysis, core module involving three-carbon compounds
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SVI_2156 (gapA-3)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SVI_2156 (gapA-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svo04131
]
SVI_2156 (gapA-3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svo04147
]
SVI_2156 (gapA-3)
Enzymes [BR:
svo01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
SVI_2156 (gapA-3)
Membrane trafficking [BR:
svo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
SVI_2156 (gapA-3)
Exosome [BR:
svo04147
]
Exosomal proteins
Proteins found in most exosomes
SVI_2156 (gapA-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gp_dh_C
Gp_dh_N
DUF3717
Motif
Other DBs
NCBI-ProteinID:
BAJ02127
UniProt:
D4ZKC8
LinkDB
All DBs
Position
2489658..2491094
Genome browser
AA seq
478 aa
AA seq
DB search
MSADKHLQSWQERFEMAEAMQPLLGKLYRNQGVEVVLYGKPLLNASTIEIIKSHRLVRRF
VGHKLRLRESFPFVEALSKLAVKQCKVDIGKLAINYWREHKDGSDIEAYMSRELASAIDH
EDTQEARDVVLYGFGRIGRLLARLLIEKTGVSNKLRLRAIVLRGGRKGDLEKRASLLRRD
SVHGPFNGSVEVDEENNALIANGTYIQVIYANSPDEVDYTKYGIKDALVVDNTGIWKDED
GLGLHLKSKGVSKVLLTAPAKGQIKNIVFGVNESDILSEDKIVSAASCTTNAITPILKAM
NDKYGITNGHVETIHSYTNDQNLIDNYHSADRRGRSAPLNMVITETGAAKAVAKALPALA
GKLTGNAIRVPTPNVSMAIISLNLEGETDKEQVNEYLRDMSLHSDLQNQIDFTDSTEIVS
SDLVGSRYAGVIDSHATIAEGNRAILYVWYDNEFGYSCQVVGVMQKMLDLNYQSLPNS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgataaacacctacaaagctggcaagaacgtttcgaaatggcagaggctatg
cagcccttgcttggtaagttatatcgtaatcaaggtgtcgaagtcgttttatacggtaag
ccgcttctcaatgcctctaccattgagatcatcaaatctcaccgtctggtgcgtcgtttt
gttggccataaactcagattgcgtgaaagctttcctttcgtagaagcattaagcaaactc
gccgttaaacagtgtaaagttgatataggcaagctggctatcaactattggcgtgaacat
aaagatggcagtgatatcgaagcttatatgagccgtgagcttgcatctgctatcgatcat
gaagatacccaagaagccagagatgttgtgctttatggttttggccgcatcggtcgctta
ctcgctcgcttattaatagaaaaaacgggtgtgagtaataagctacgtcttcgcgctatc
gtactacgcggtggtcgcaagggtgatttagaaaaacgtgcgagcctgcttagacgtgat
tcagttcatggaccgttcaatggttctgtagaagtcgatgaagagaacaatgcccttata
gctaacggcacgtatattcaggtgatatatgctaactcaccagatgaagtggattacact
aagtacggcatcaaggatgcgctagtagtagacaacacaggtatctggaaagatgaagat
ggacttggccttcatctaaagtctaaaggtgtatctaaagtcttgcttactgccccagct
aaaggtcagattaaaaacatcgttttcggtgtgaatgaatctgacatcctcagtgaagac
aagatagtgtcagcggctagctgtactactaatgcaatcacaccaatattgaaagcgatg
aatgataagtatggcatcaccaacggtcatgtagaaactattcactcatataccaatgac
cagaatttgattgataactatcatagtgctgatcgtcgtggtcgtagtgcaccattaaac
atggttatcactgaaacaggtgcggctaaagcagttgctaaagctttaccagcacttgca
ggtaagctaaccggtaatgctatccgtgttcctacaccgaacgtatctatggccatcata
tctttgaatcttgaaggtgagacagataaagagcaggttaatgaatacctacgtgacatg
tcattgcattcagaccttcagaatcaaattgattttactgactcaacagagatagtctcg
tctgatctggttggttctcgttacgccggcgttatcgattcacacgcgacgattgctgag
ggtaaccgtgccattctttatgtttggtacgataatgaatttggttacagctgccaggtt
gtaggcgttatgcagaagatgcttgatcttaactatcaatcattaccaaacagctaa
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