Shewanella violacea: SVI_2209
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Entry
SVI_2209 CDS
T01206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_2209
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_2209
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
CarbopepD_reg_2
bPH_4
Motif
Other DBs
NCBI-ProteinID:
BAJ02180
UniProt:
D4ZKI1
LinkDB
All DBs
Position
2537399..2539546
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AA seq
715 aa
AA seq
DB search
MSIDGGNKTTSDAQGRYKLSIADNSHVHLHVSDDNFRHTDHDLQITTGFVTQDISLEQIM
MENIVITASPFLRSAMESTTPISVMTADELKLNIAPSLGDTLEKLPGVQASHFGAGASRP
IIRGMSGPRVLVLENGLSVGDASTVSADHAVTTEAGTAQQIELLRGPGSLLYGNGAIGGV
VNVVNNRVDERAVDELSGNFGSHYVTGNNGRTVNGELNGGNGKFNWHLDGTHRETDDFDI
AGNAIENQSKTHGSLANSQLKLDDYAAGVGYTGDDSFISISGARTESNYGIPGRGVEGDP
DITIDLKKTAWQLHSGLLDPFSGVSKLRFDAGYTDYQHAEQEDGVADTFFYNKQSEARLS
VNNTPWGEWQGVMGLHAIHRDFSVRGEEALTPDSKTDTVAAFIVQERRIDDFRIELGGRI
EHYRLDPNSMKLQTLAGTQDYQPEGVSDNNLTLSAGIVWDFDPAYNLGLSFERAERSATA
EELYSFGAHDATQSFEVGSQFMIENGNVIPNSDTSDKEIANNIDLTLRKLEGAWTGSLSL
AYNRVNDFYYEKDTGLVASDIGEEGDLPVYQFTQGDVELYSVEAQAKIPFNDTWSLDLLS
DYTRGKLVDGGNLPLISPMRFGSTLNFDLQDWHADVGVMAYAKQTDTAENETDTAGYALV
DSAVTYHFATENGDMMFYVKGNNLLDQDARPHTSLLKEYSPLMGRSVMIGVNYDF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatcgacggtggcaacaagacaaccagtgatgctcaaggtcgatacaagttatct
atcgccgacaacagtcatgttcatctccatgtgagtgatgacaacttcaggcatacagat
cacgatttacagataaccacaggttttgtgacccaagatatttcactggagcagatcatg
atggaaaacattgtgatcaccgcatcaccttttctgcgctcagccatggaaagcaccacg
ccaatcagcgtgatgacagcagatgaactcaaactaaatatcgccccaagtctaggagac
acgctggagaaactccccggtgtgcaagcttctcattttggtgctggtgccagccgcccc
attattcgcggcatgagtggtcctcgtgttctagtgttagaaaatggcctctccgtggga
gatgcctcgacggtatcggcagatcatgcggttactactgaagccggaacggcgcagcaa
atcgaacttctgcggggacctggatcgctactctatggtaacggtgccattggtggcgtc
gtcaatgtggtgaataaccgcgtcgatgaaagagctgtcgatgagttatccggtaacttt
ggttcccattatgtgacaggcaataatggccgcaccgtcaatggtgagctaaatggcggt
aacggtaaattcaattggcatttagacggtacacatcgcgagacagatgacttcgatatt
gccggtaatgccattgaaaatcagagcaaaactcacggttcactggccaatagtcagcta
aaactggatgactacgccgccggtgtcggctacacaggtgatgactcttttatcagtatc
tcaggggctcgtactgaatctaactatggtattcctggccgcggggtggaaggcgatcct
gacatcaccatagatctgaaaaaaacggcatggcaacttcattctggcctgttagatcca
ttctccggggtgagtaaactgcgctttgacgctggttataccgattaccaacatgccgag
caggaagatggcgtcgctgatacctttttctacaataagcaaagtgaagcccgtttgagt
gtaaacaatacaccttggggggaatggcaaggggtcatgggtcttcacgccattcataga
gatttttctgttcgaggggaagaggcactgaccccagacagtaaaaccgatactgttgcc
gcatttatcgttcaagaacgaagaattgatgactttcgcatcgaactcggtggccgcata
gagcattatcgtttagaccctaactctatgaagctacaaaccttagctggcacacaagac
tatcagcccgaaggcgtgagtgataacaatctgacgctttcagctggtattgtctgggat
ttcgatcccgcctacaacttaggcttgtccttcgaaagagccgagcgctcggccaccgcc
gaagagctttatagttttggtgcacacgatgcgacgcaaagcttcgaagtgggctctcaa
ttcatgattgaaaatggcaatgtcattcccaacagcgacactagcgacaaggagatcgcc
aataacatagatctcaccctgagaaaattagagggagcctggactgggtctttgagtctg
gcctataacagggtcaatgatttctactacgaaaaagataccggcctagttgcctcggat
attggtgaagagggagatctacctgtctatcaattcacccaaggcgatgttgaactctat
tcggtggaagctcaagccaagataccctttaacgatacctggtcactggatctactcagt
gattacacccgaggaaaattggtcgatggtggcaatttaccacttatctcacccatgcgt
tttggctcaacactgaactttgatctccaggactggcatgccgatgtgggtgtgatggct
tatgctaaacagacagataccgccgaaaatgagacagatacggcaggttatgccttggtc
gattctgctgtgacctatcattttgctacagaaaatggcgatatgatgttctatgtgaaa
ggcaataacttactcgatcaagatgccaggccacatacttcgctactgaaagagtactcg
ccgcttatggggcgtagtgtcatgatcggcgtgaactacgatttttag
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