Shewanella violacea: SVI_2218
Help
Entry
SVI_2218 CDS
T01206
Name
(GenBank) sensory box/GGDEF family protein
Organism
svo
Shewanella violacea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_4
PAS
PAS_9
PAS_8
GGDEF_2
PAS_3
Motif
Other DBs
NCBI-ProteinID:
BAJ02189
UniProt:
D4ZKJ0
LinkDB
All DBs
Position
complement(2546390..2547310)
Genome browser
AA seq
306 aa
AA seq
DB search
MDKLTEIQVPDLLSFLSNNSPMLQLMIDTLPVPIFYKDIAGVYLGCNKAFEDFIKLTRDQ
MIGRSVYELFDKELADVYQQADQALFDEPGIQVYEKQIRSKEGDELFVKFHKTSFFDKDD
KVAGLIGVIFDITEQKRLESVLTKQASFDDLTGLFNRREGLKQGEVMHKIASRGEGNFAV
LMLDLDHFKQVNDKHGHLVGDRALQFVSKILTDNSRMSDVLIRYGGEEFMIIISGSSEDG
AGALAEYYRASLANNPMILDDGTELRLTVSIGLSYFRHQSLGQLIHEADTALYEAKRSNR
NTVCSF
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggataaattgaccgaaatacaagtaccagatctattatcgtttctatcgaataacagt
cctatgttgcaattgatgatagacaccttgcctgtgcctatcttctacaaagatattgcc
ggagtttatcttggttgtaataaagccttcgaagactttatcaagttaactagggatcag
atgataggtcgtagcgtttacgagctctttgacaaagagctggccgatgtttaccagcaa
gccgatcaggccctgttcgatgagccaggtattcaggtctatgagaagcagatccgctca
aaagaaggtgatgagctgttcgttaaatttcataagaccagttttttcgataaggacgac
aaggttgccggccttattggggttattttcgatatcaccgagcagaaaaggctcgaatcc
gtgctgacaaagcaggccagctttgatgatctcactgggctgtttaatcgccgcgaagga
ttgaagcagggagaggtgatgcataaaatcgcctctcgcggtgaggggaattttgcagtg
ctgatgttagatctcgatcacttcaagcaagtaaacgataaacatgggcacttggttggc
gatcgcgcactgcaattcgtctctaaaatcctcaccgataacagtcgtatgtccgatgtg
cttattcgctatggcggcgaagagtttatgatcatcatctcggggagcagcgaagatggc
gcaggggcattggccgagtattaccgagcaagtttagccaataaccccatgatcttagac
gatggaactgagcttagattgaccgtgagtatcggcctgtcttactttcgccatcaatct
ttaggtcagctgatccatgaagccgatactgctctatatgaagcgaaacgcagcaacaga
aataccgtgtgcagtttctag
DBGET
integrated database retrieval system
