KEGG   Shewanella violacea: SVI_2235
Entry
SVI_2235          CDS       T01206                                 
Name
(GenBank) type III secretion system apparatus protein, HrcV family
  KO
K03230  type III secretion protein V
Organism
svo  Shewanella violacea
Pathway
svo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:svo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SVI_2235
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:svo02044]
    SVI_2235
Secretion system [BR:svo02044]
 Type III secretion system
  Type III secretion core apparatus
   SVI_2235
SSDB
Motif
Pfam: FHIPEP
Other DBs
NCBI-ProteinID: BAJ02206
UniProt: D4ZKK7
LinkDB
Position
complement(2565329..2567386)
AA seq 685 aa
MNLITRWLNIAGGRLDIILSAMLMVAVFMMILPLPTALIDLLIAFNLCLSILLLMIAIYI
RDPLEFSVFPSLLLITTLYRLALTVSTSRLILLQHDAGEIVYTFGKFVVGGNLAVGIIIF
TIITIVQFIVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGIIDAQEAKRQRTQVQK
ESQLYGAMDGAMKFVKGDAIASIIVILANIIGGIAVGVMQHGMSASEAVNTYAILSVGDG
LISQIPALLISLTAGLIVTRVPGEKRQNLANELVSQMGRQPSSLQMAGIMMFVFAIIPGF
PLITFGFLGSLTFGFSWWLIRKKKIAEEQGSPHFSDTSASGEVDADGNMSPGAIPVMLCL
GEDVSITGVKEALQKLRWQLFEELGVPLPEIQLQVIKNGRKGQFDVLLYQEVVLQLQIDP
EESLLVDQNVTLLSRVESLNFNGEELHWIKGNVVEQALEQGLPVLSKETIPAYLVGKVIR
RYAGEFIGVQETRYLMDAIEVKYGELVKELQRVLSVGKVADILQRLVDEGIAIRDLRTIF
ETLVEWVAKEKDVIMLTEYVRIALRRHIRRKFVSPQGWISVLMVGDGIENLIRESIRQST
AGSYSALDLEQSNLILTAVVQQLPAQQSCVLLTSLDVRRYLRKIVEKELFMTPVLSFQEL
GDDAEIKVMAHVDLVGESLDAAMAS
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgaacttaattactcgttggttgaatatagcgggaggccgattagatattatccttagc
gccatgctaatggtggctgtattcatgatgattttaccgctgcctaccgcattaatcgat
cttctcatcgcatttaatttatgtttatccattctactattgatgattgcgatatatatt
cgcgacccgctcgaattttctgtttttccctctttattattgatcacgactttatatcgt
ttagcgttgaccgtaagtacgagtcggctcattttattgcaacatgatgctggtgagatt
gtgtataccttcggtaaattcgtcgttggcggtaacttagctgtcgggattattatattt
acgattattactatcgtgcagttcattgtgatcacaaaaggctctgaacgggtagcagaa
gtcagtgctcgtttttcattggatgcaatgcctggtaagcagatgagcatcgatggtgat
atgcgtgccggcatcattgatgctcaagaggcaaaacgtcagcgaacccaagtgcaaaaa
gagagtcagctttatggtgctatggacggtgcgatgaaatttgttaagggtgatgcaatc
gcgagtattatcgttattttagcaaatattataggggggattgccgtcggtgttatgcag
catggcatgtctgcatcggaagcggtaaatacctatgccatattatctgttggtgatggt
ttgatttcacaaatccctgcgctgttaatttccctcactgccggactgattgttacacga
gtgccaggcgaaaagcgtcaaaacttagcaaatgaattggtgtcgcaaatgggtcgacaa
ccatcttcattgcagatggctggaataatgatgtttgtttttgccatcatccctggtttt
cccctgataacgttcggtttcttaggctcattaacttttggtttctcctggtggctaatc
cgtaagaaaaaaattgctgaggagcaaggtagtccccatttttcagacacctctgcatcc
ggagaagtcgatgccgatgggaatatgtctccgggggctattcctgtgatgctttgtctt
ggggaggatgtatcgattacaggagtcaaagaggcattacaaaaattacgttggcagcta
tttgaagagcttggtgtgccattacctgagatccaattgcaagtcattaaaaatggtaga
aaaggacaatttgatgttctgctgtatcaagaggttgtgttgcaactacagatagatcct
gaagagtcgctacttgttgatcaaaatgtcacattacttagccgggttgaatctcttaat
tttaatggtgaagagttacattggatcaaggggaatgttgtagagcaagcactggagcaa
ggtttacctgtacttagtaaagagactatacccgcttatcttgtgggcaaagtcatcaga
aggtatgccggtgaatttatcggtgtacaagagactcgttatctgatggatgctatcgag
gtgaagtatggtgaattagtcaaagagctacaacgcgtattgtcagttggaaaggtggcg
gacatccttcaacggcttgtggatgaggggatagccattcgagatctgcgtaccattttt
gaaaccttagttgagtgggtcgctaaagagaaagatgtcattatgttaacggaatatgta
cgtattgcattgcgccgtcatattcgaagaaagtttgtctctccccaaggctggatatct
gtactcatggttggcgatgggattgagaacttgatccgagaatctattcgccagtctact
gctggatcatactctgcattagatttagagcaaagcaaccttatcttaaccgcggtagtg
cagcagttacctgctcagcaatcctgcgtgttattaacttcactggatgtacgtcgttat
ttgaggaaaattgtagaaaaagagttatttatgacgcctgtattgtcattccaggagtta
ggggatgatgctgaaataaaggttatggctcatgtcgatttggtgggagagagtttagat
gctgcaatggcgagctaa

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