KEGG   Shewanella violacea: SVI_2259
Entry
SVI_2259          CDS       T01206                                 
Name
(GenBank) type III secretion system apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:svo02044]
    SVI_2259
Secretion system [BR:svo02044]
 Type III secretion system
  Type III secretion core apparatus
   SVI_2259
SSDB
Motif
Pfam: Yop-YscD_ppl_1st Yop-YscD_ppl_2nd Yop-YscD_ppl_3rd Yop-YscD_cpl CdsD_PD2 Toprim_2
Other DBs
NCBI-ProteinID: BAJ02230
UniProt: D4ZKN1
LinkDB
Position
complement(2584524..2585732)
AA seq 402 aa
MSSKYKLLWLNGPLQGREFSLPLGSITIGPDGDIVAILSEVSELELFIDEEGVHLSKEVP
TWVDGKPVEGLTLLPLDQVIELDDIAILVGKDDDVLAIRGVPKHMLVRGGPLFFLGFTSL
ISLLVLLFVLFSPVEESHLQIVLTPSQWLSRELNQSGLKSIKVSWSDSGVATLSGYCKEQ
QQMADLLSDLSNHGVVFMDHTLCGDQLLSNVKQILVQNGFSDAVVNLNGELGSVNISGAI
SAGEDWNKTVDDFNRLPGLISWNVSSQVNKQIKELITILRKDQLLTGIVVKRVDNTLVLT
GKVSEEKQRQVMSVATKLNLSYPGGFKLVFQNIPVRDELIQFFNSQIVSFGGNTKFPFVE
LEDGSRLSVGSDLSIGYTISFMNINGMDLIRAGEIVHIPIII
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgtcttcaaaatacaaattgttatggttaaacgggccccttcaaggacgtgagttcagt
ttacctttaggcagtattaccataggccctgatggcgatattgttgccatattatctgag
gtcagtgagttagagttattcattgatgaagagggggtgcacctatcaaaagaggtccca
acatgggtagatggtaaacctgttgagggtctaacacttctccccttagatcaggttatt
gaattagatgatatcgctattttggtgggtaaagatgatgatgttctcgccataaggggt
gttcctaagcacatgttagttaggggggggccattattttttctgggattcacatcgtta
atttctttattggttttgttgtttgtgttgttttcaccagtggaggaatcacacttacag
attgtgttaacaccgagtcaatggttatcaagggagcttaatcaaagtggtttgaaaagc
ataaaggtctcttggtctgattcaggtgtggctaccttaagtggctattgtaaagagcag
cagcaaatggccgatctattaagtgatttaagtaatcatggggtcgtgtttatggaccat
accttatgtggcgatcagctgttgtcaaatgtgaagcagatattagttcaaaatggattt
tcagacgccgttgtaaaccttaatggcgaacttgggagtgtcaatatatctggtgcaatt
agtgctggcgaggactggaataaaactgtcgatgattttaatcgtttgcctggattaatt
agctggaatgtttctagtcaagtcaataaacagataaaggaattgatcactattcttaga
aaagaccagttacttactgggattgtggtgaagcgagtagataatactttagtactcaca
ggtaaagtcagcgaagaaaagcaacggcaggttatgagtgttgcaactaaattaaacttg
agttatccaggtggatttaaattggtatttcaaaatattccagttagagatgaacttatt
cagttctttaattcacagattgttagttttggtggaaacactaagttcccatttgttgaa
ttagaagatggctctaggttatcagtggggagtgatttaagtattggttatacaataagc
ttcatgaatattaatgggatggatttaattcgcgccggtgagatagtacatatcccaata
attatatag

DBGET integrated database retrieval system