Shewanella violacea: SVI_2315
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Entry
SVI_2315 CDS
T01206
Symbol
edd
Name
(GenBank) 6-phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
svo
Shewanella violacea
Pathway
svo00030
Pentose phosphate pathway
svo01100
Metabolic pathways
svo01120
Microbial metabolism in diverse environments
svo01200
Carbon metabolism
Module
svo_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
SVI_2315 (edd)
Enzymes [BR:
svo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
SVI_2315 (edd)
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
BAJ02286
UniProt:
D4ZKT7
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All DBs
Position
complement(2651838..2653664)
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AA seq
608 aa
AA seq
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MHAVVQSVTDRIIERSKVSRAKYLAALNEAKQKGVHRSSLSCGNLAHGFAACNPDDKQSI
KGLTKANIGIVTSFNDMLSAHQPYESYPDLLKQACAEVGSVAQVAAGVPAMCDGVTQGQP
GMELSLLSREVIAMSTAIGLSHNMFDGALLLGICDKIVPGLLIGALSFGHLPMLFVPAGP
MKSGIPNKEKARIRQKFAQGKVDRAELLEAESASYHSAGTCTFYGTANSNQLMLEVMGLQ
LPGSSFVNPDDPLREVLSKTAAKQVCRLTEMGTQYTPIGEIVNEKSIVNGIVALLATGGS
TNLTMHIVAAARAAGVIVNWDDFSELSDAVPLVARVYPNGHADINHFHAAGGMAFLIKEL
LDAGMLHEDVNTVAGYGLRRYTQEPRLIDGEIKWVEGQVTSLDAEVLTSVTAPFQANGGL
KLLKGNLGRAVIKVSAVSEQHRVVEAPAVVIDDQNKLEAIFKAGDLDKDCVVVVKGQGPK
AVGMPELHKLTPILGTLQDRGFKVALLTDGRMSGASGKVPAAIHLTPEALDGGLIAKVQS
GDMIRVDALTGELTLLVSDAELATRVAEKVELRKTNYGMGRELFGALRSNLSSPETGARC
TSAIDEIF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcagttgtacaatctgtaaccgataggattatcgaacgcagcaaagtgtcacga
gctaaatacctggcggcgctcaatgaagcaaaacaaaaaggcgttcatcgcagctctttg
agttgtggtaacttggctcatggttttgcagcttgtaatccagatgataagcaatcaatc
aaaggcctaacgaaggctaacattggcatagttacgtcatttaacgacatgctttcggct
caccagccctatgaaagctatccggaccttttgaagcaagcctgcgccgaagtgggtagt
gtggcccaggttgcagctggcgtgccagccatgtgcgacggtgtgactcaaggtcaaccc
ggcatggaactcagtcttctaagccgtgaagtcattgctatgtcgactgcaataggcctg
tctcataacatgttcgatggtgccttgttactgggtatatgtgacaaaatcgtaccgggt
ctgttaatcggagccctgagcttcggtcatctgcctatgttatttgtgcctgctggtccg
atgaaatcaggcattcctaacaaagagaaggcccgtattcgtcagaaatttgctcaaggt
aaggtagacagagcagagttactcgaagctgaatcagcctcttatcacagtgctggtact
tgtaccttctatggtacggctaacagcaaccagttgatgctcgaagtcatgggtctgcaa
ttacctggctcgtcgtttgttaatccagatgatccattaagagaagtgctcagcaagact
gctgcaaagcaagtttgtcgcctgactgagatggggactcaatacacgcctatcggtgag
attgtaaacgagaaatccatcgtaaatgggatcgtcgcgctattggccacaggcggttcg
actaaccttaccatgcacattgtcgcggctgcgcgtgctgccggagtcatagtcaactgg
gatgatttctcagagttatcggatgctgtgcccctagttgctcgggtatatccgaatggc
catgcggacatcaaccatttccacgccgcaggcggtatggctttcttaattaaagagcta
ctcgatgcgggtatgctccatgaagacgtcaatacagttgcgggttatggacttcgtcgt
tatacccaagagccgagattaatcgatggcgaaattaagtgggtagaaggtcaagtcacc
agtctggatgccgaggtattaacttcggttacggcgccattccaagccaacggtggtttg
aaactgctaaaaggtaatttgggccgcgctgtcatcaaggtgtctgctgtatctgagcaa
catagagttgttgaggctccagcggttgtcatcgatgaccaaaataaactcgaagccatc
tttaaagctggcgatcttgataaagattgtgtcgttgtcgtcaaggggcagggccctaag
gctgtcggtatgcctgagttacataagctcactccaatacttgggacacttcaagatcgt
ggttttaaggtcgctctattgaccgacggtcgcatgtcaggagcctcggggaaagtgcct
gcagctattcaccttacacctgaagcgctcgatggtggcttgattgccaaggtgcaatcc
ggtgacatgatccgtgtcgatgcattaactggtgagcttaccctattggttagtgacgca
gaattagcgacgcgcgtggcggaaaaagttgagcttcgtaaaacgaattacggtatgggc
cgagagttattcggtgcattaagatcaaatttaagtagtcctgaaacaggtgctcgctgc
accagcgccatcgacgaaatcttttaa
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