Shewanella violacea: SVI_2325
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Entry
SVI_2325 CDS
T01206
Name
(GenBank) sensory box protein
Organism
svo
Shewanella violacea
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
PAS_9
GAF_2
GGDEF_2
PAS_4
Strep_his_triad
Motif
Other DBs
NCBI-ProteinID:
BAJ02296
UniProt:
D4ZKU7
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Position
complement(2665070..2667262)
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AA seq
730 aa
AA seq
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MLTFLGTFVKKREYQDLLECIVNSKEKQEGNFQKTAELATELLCQQLAVTYVGVCMLSCE
DNQISATANYGPLLPVVYSRPAPFDCPDYIAELRNKCLIDINDVDSDPRVIEIADAYFKP
KGIMSSLDVAIRINGHLEGILYLERTSIAPWSDSEIHIATHVADQLALTLATHNAYENDE
RLTLLLSADEESEQVSMLINLKSDLIEYVNQAHEWLSGMPKRQVIGHSFKQLDFIKQYPQ
QAKGILEQVSMGAVAKGESLVVRSDGRQYWLRYSVKQFITERGNHYALVKADDISDEKQY
QAKLERLAWRCGLTGLYNRSYFNKELEHCKSGQLILIDLCGFKRFNDTYGHQNGDELLIE
IARRLKHFANVNKTEHLARVGSDEFAIIIPTQNQVDMDYITARLYSQLTQPVHIGREQIQ
AKPALAIVDIESVEDSFVPLACADIALQYAKTKQGDKIQVFNNALLNTFKEDAQIERDLQ
TALRGREFELYYQPLKDLKTRTYIGAEALIRWHHPKKGVLYPGAFIDIAEQTGLINAIGT
WVLEAACRQLNLWQHHQIDISMHVNVSARQFFSGNLFDQVWNLVSRYRLQPGSLILEITE
TELMEDIDYATNLCTELSELGVGLAIDDFGTGYSSMRYLKQFPISKLKIDRSFISDLTVS
RESREIVSAIIAMASALNISLTAEGVETKEQEDFLSEHKCHQAQGFLYSPALRESEFSQF
LFKSNHEMIH
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ttgcttacttttttagggacattcgtgaagaagcgtgagtatcaagatttattagagtgc
atagttaactctaaagaaaaacaagagggtaattttcagaaaacggcggagttggcgact
gagttattatgtcagcaactcgctgtcacctacgtaggtgtctgtatgctctcttgtgaa
gataatcaaattagcgcgaccgctaattatggtcccttgctgcctgttgtgtattcacgc
cccgccccctttgattgtcctgattatatcgctgaactcagaaacaagtgtctgatagat
ataaatgatgtggactcggaccctagagtcatagagatagctgatgcgtatttcaagcct
aaagggataatgtcatccctagatgttgccataagaattaacggtcatctcgaaggtatc
ttatatttagaaagaacatcgatagccccttggtccgatagcgagattcatatcgcgact
catgtggccgaccaacttgcgctgactctggcgacccacaatgcctatgaaaacgatgag
agattaactttattactcagtgccgatgaagaatccgagcaggtgagtatgttgattaac
ctgaaatcagatttgatcgaatatgtaaaccaagcccatgaatggctatccggtatgcct
aaacgtcaagtcattggacattcattcaaacaactcgattttattaaacaatatccgcaa
caggctaaaggcatcctagaacaggtgtctatgggagcagtggctaagggagaaagccta
gttgtgcgctctgatggcaggcaatactggctcagatattcagttaaacagtttatcacc
gaacgtggcaatcattacgcactggttaaagccgatgatatatcagatgagaagcagtac
caggcaaaattagagcgtttagcctggcgttgtggtttgacaggactctataatcgcagc
tatttcaataaagagttagaacactgtaaatcaggccaattgatcctcatcgatctctgc
ggctttaaacgtttcaatgatacctatggtcatcaaaacggtgacgaattactgattgaa
atcgccagacgtttgaagcattttgctaatgttaataaaaccgaacacctcgctagagtg
gggagtgatgaatttgcgataattattcctacgcaaaatcaagtggatatggactacatc
acagccaggttatacagtcagctgactcagcctgttcatataggccgtgaacagatccaa
gctaaaccggctctggctattgtagatattgagtctgttgaagacagctttgttccctta
gcttgtgccgatatcgctttgcaatacgccaagacaaagcaaggcgacaaaatccaagta
tttaataatgccttactcaataccttcaaagaggatgcgcagatagagcgtgacttacaa
accgcactgagagggagagagtttgaactctactatcagccacttaaagatcttaagacc
agaacatatataggtgcagaggcattgatccgttggcaccaccctaagaaaggggtgctg
tatcctggtgcttttatcgacattgccgagcaaacaggcctgataaatgccattggaact
tgggtattggaagctgcatgtaggcaactcaatttatggcaacaccatcaaattgatatt
tctatgcatgtgaatgtttccgctcgccagttctttagcggtaatcttttcgatcaggtg
tggaacttagtgtcgcgctatcgacttcaacccggctcgctgatcctggagatcacagag
acagaattgatggaagacatagattatgcgactaatttatgtactgagctctctgagctt
ggcgtagggctggctatcgatgattttggtactggttacagttcgatgcgttatttgaaa
cagtttcccatcagtaagcttaaaattgaccgttcatttatttccgatcttacagtaagt
cgagagagtcgtgagattgtgagcgccattattgctatggcttcggcgctcaatatttcc
ttaactgccgagggggtagagactaaggaacaggaagatttcttatcggaacataagtgc
catcaggctcaaggtttcctttacagtcccgccctaagagagtctgagtttagccagttt
ttattcaaatcaaatcacgagatgattcactaa
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