Shewanella violacea: SVI_2333
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Entry
SVI_2333 CDS
T01206
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
svo
Shewanella violacea
Pathway
svo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SVI_2333 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svo03400
]
SVI_2333 (uvrB)
DNA repair and recombination proteins [BR:
svo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SVI_2333 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SVI_2333 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA
Ish1
Kinesin
Motif
Other DBs
NCBI-ProteinID:
BAJ02304
UniProt:
D4ZKV5
LinkDB
All DBs
Position
complement(2673382..2675397)
Genome browser
AA seq
671 aa
AA seq
DB search
MTESIFRLESDYSPAGDQPKAIAKLVDGIESGLATQTLLGVTGSGKTFTIANVIKKMGRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPSTNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPESYLKMLLHLRVGDFMGQRDILIRLSEL
QYKRNDIALDRGTFRVRGEVIDIFPADSDKNAIRVELFDDEIERLSLFDPLTGHIIKRIA
RISVYPKSHYVTPREKIIAATEEIKVELRERKQQLLDNNKLIEAQRISERVQYDLEMMVE
LGYCSGIENYSRYLSGRATGEGPPTLLDYLPDDGLLIIDESHVTVPQIGAMYKGDRSRKS
NLVEYGFRLPSALDNRPLKFEEFEDLMPQTIFVSATPSQYEIDKCDGEIAEQVVRPTGLL
DPEVEVRPVGTQVDDLLSEIGKRIKVDERVLVTTLTKRMSEDLSEYLDEHGIKVRYLHSD
IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTM
GRAARNINGKVILYADRITKSMAAAMGETDRRRKMQHQYNLDNGITPKGVVKKITDVMDV
GERDKGILGDYSSLNVAQNRAKYVVQDAASLSHQIDALEKQMHEHAKNLEFEQAAAVRDQ
VLKLRDAFIKA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaatcaatatttcggctggaatcagattattcgcctgcaggcgatcaacctaag
gcgatagctaagttggttgatggcattgaatcaggccttgcgactcagactttactcggg
gttacaggctcaggtaaaacattcaccattgcgaatgttatcaagaagatgggcaggccg
actatcataatggcccccaacaaaaccttggcggcccagctatacggtgagatgaaagag
tttttccctcacaacgctgtagaatattttgtttcttactatgattattatcaacccgag
gcatacgttccctccaccaatactttcatagagaaagatgcatcggtgaatgcacatatc
gagcagatgcgtctatcagccacaaaagcactcctcgaaagaaaggatgtggtgttaatc
gcctcggtatctgcaatttatggcttaggagaccccgagtcttatttgaagatgttgctg
caccttagggtaggtgatttcatggggcaaagggatattctcatacgtctcagtgaactc
caatacaaacggaacgatatagcgttagatcgtggtacttttcgagtccgaggcgaagtg
attgacatatttcctgcagattcagacaagaatgcgattcgtgttgagctttttgatgat
gagattgagcggttaagcctgttcgatccgttaactgggcatattataaagcgtatcgcc
cggataagtgtgtatcccaagagtcactatgtcactcccagagagaaaattattgcagct
actgaagagataaaagtagagctgcgagaacgtaagcagcaattgctggacaataataaa
ttgatcgaagcccaacgtatatctgagcgagttcaatatgacttagaaatgatggtggag
ttaggttactgctcaggtattgaaaactattcacgatacctatccggtagagccacagga
gagggcccaccgacactgctggactatttgcccgatgatggcttgctgatcatagatgaa
tctcatgtcactgtgcctcaaatcggtgccatgtataaaggtgaccgctccagaaagtct
aacctagtggaatatggctttcgtctgccttctgcactggataaccgtcctctcaaattt
gaagagttcgaagatttgatgccgcaaactatttttgtctccgcaactccgagtcaatat
gagatcgataaatgcgatggagaaattgctgagcaagtggtaaggcctactggcttactg
gatcctgaagtcgaagtcagacccgtggggacacaggtcgatgatctgctctctgaaata
ggtaaaaggattaaggtcgatgagcgagtcttggtaactacgttaacaaaacgcatgtcg
gaagacttaagtgaatatcttgatgagcatgggatcaaggtaaggtatctgcattcagat
atcgatacggttgaaagagtagagattattcgtgatcttcgtttgggggtcttcgatgtg
ctggtaggcattaacttactccgtgaaggcttggatatgccggaagtatcactggtgtgt
attctagatgctgataaagaggggtttttacgctccgaacgctcgttaattcaaactatg
ggccgcgcagcccgaaatattaatggcaaggtgatcttgtatgccgaccgcatcactaaa
tccatggcggcagctatgggggaaacggatcgacgccgcaagatgcagcatcaatataat
ctcgataacggtattacgcctaaaggcgtcgtgaaaaaaattaccgatgttatggatgtg
ggtgagagagataaaggcatcttaggtgattactccagtcttaacgttgcacaaaacagg
gctaaatatgtcgtccaggatgcggcaagtttaagtcatcaaattgatgcactggagaag
cagatgcacgaacatgctaaaaacttagagtttgaacaggctgcggcggtaagggatcag
gtattgaagctcagagatgcatttattaaagcgtaa
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