Shewanella violacea: SVI_2352
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Entry
SVI_2352 CDS
T01206
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
svo
Shewanella violacea
Pathway
svo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SVI_2352 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svo03400
]
SVI_2352 (ruvC)
Enzymes [BR:
svo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
SVI_2352 (ruvC)
DNA repair and recombination proteins [BR:
svo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SVI_2352 (ruvC)
RecFOR pathway proteins
SVI_2352 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
BAJ02323
UniProt:
D4ZKX4
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All DBs
Position
complement(2698225..2698746)
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AA seq
173 aa
AA seq
DB search
MSIILGIDPGSRITGYGVIKRNGRHPIYLGSGCIRTSSDDFAYRLKQIFDGVSEIIRQYQ
PTEFAIERVFMAKNADSALKLGQARGAAIVAATNVDLPVGEYSATQIKSAVVGTGKAQKS
QVQHMVQQILKLSASPQADAADALGVAICHFHTSQSLLALGGVASKRTYGRYR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataatactcggtatagatcccggttcaaggatcactggctatggggtgatcaaa
cgaaacggtaggcaccctatctacttaggaagtggttgtattcggactagttctgatgat
ttcgcctatcgccttaagcaaattttcgatggggtttccgaaataatacgtcagtaccag
cccacagaatttgcgattgagcgtgtgtttatggctaaaaatgccgattcagcgcttaag
ttaggccaagccagaggtgcggccatcgttgctgcgaccaatgtcgatcttcctgttggc
gaatattccgcgacccaaataaaaagtgccgtagtcggcacgggtaaggcgcaaaaatca
caggttcaacacatggtacagcaaattctcaaactgtcggcttccccacaagctgatgcc
gccgatgcattaggtgtcgcaatttgtcattttcataccagtcaaagcctcttggctctc
ggtggcgtggcaagtaaaagaacatatggacgatatagatga
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