Shewanella violacea: SVI_2354
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Entry
SVI_2354 CDS
T01206
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
svo
Shewanella violacea
Pathway
svo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SVI_2354 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svo01007
]
SVI_2354 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_2354 (aspS)
03029 Mitochondrial biogenesis [BR:
svo03029
]
SVI_2354 (aspS)
Enzymes [BR:
svo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SVI_2354 (aspS)
Amino acid related enzymes [BR:
svo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SVI_2354 (aspS)
Transfer RNA biogenesis [BR:
svo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SVI_2354 (aspS)
Prokaryotic type
Other AARSs
SVI_2354 (aspS)
Mitochondrial biogenesis [BR:
svo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SVI_2354 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BAJ02325
UniProt:
D4ZKX6
LinkDB
All DBs
Position
complement(2699625..2701412)
Genome browser
AA seq
595 aa
AA seq
DB search
MRSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVA
CSLRSEFCVQIKGLVRARPDSQVNNQMRTGEIEILGTSLTVLNSSAPLPINMDKNQHNTE
EQRLKYRYLDLRRPEMAERIIFRAKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MSSAQVMDKTEEMMRSLFKELLNVDLGEFPKMTFAEAMRRFGSDKPDLRNPLELIDVADL
LTDVEFKVFQGPATDPEGRVAVLCIPGGAKLSRKQLDEYAKYATIYGAKGLAWMKINDLD
KGLEGIQSPVLKFLSEDVVKGLLERTDAKSGDLILFGADKANIVSEAMGALRIKAGEDFD
LLKGDWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSGMTPEQLEADPISAISDAYDMVLN
GCELGGGSVRIHNSEMQTAVFRILGIEEEEANEKFGFLLEALRYGTPPHAGLAFGLDRII
MLMTGTSSIRDVMAFPKTTTAACPLTNAPGFANPEQLVELGIDVIKSEEEKETPE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcaatattgtggagacgttaacaagtctcacgttggacaagaagtgacccta
gtgggttgggtaaatcgtagccgtgatctaggtggagtggtttttctcgacttaagagac
agagaagggatcgtacaggttgtatatgatccggatttacctgaagtgttcgacgttgcc
tgtagcctgcgcagtgagttctgtgtccaaataaagggcctggtccgtgctcgtccagat
agtcaggtcaataaccaaatgcgtactggtgagattgagattttaggtacaagtttaact
gtcctgaacagctctgcgcctctgcctattaacatggacaagaatcagcacaacacggaa
gagcagcgacttaaataccgttatcttgatcttcgtcgtcctgagatggctgaacgtatc
attttccgcgctaaagtcaccagcgccgtgcgtcgctttctcgatggtaatggtttcctc
gatatcgaaacgcctatcttgaccaaggcaacgcctgaaggtgcacgagattatttagtg
cctagtcgtacctataaggggcagtttttcgcactgcctcagtctcctcagctgttcaaa
cagttgttgatgatgtcgggtttcgatcgctactatcaaatcgttaagtgtttccgtgat
gaagacttacgtgccgatcgtcagccagaattcacccaaatcgatatagaaacctcgttt
atgtcctctgcccaggtcatggataaaactgaagagatgatgcgtagtctctttaaagag
cttctcaatgttgatctcggtgagtttcctaagatgacgtttgccgaagccatgcgccgc
ttcggttccgacaagccagatcttcgtaatccgttagaacttatcgatgttgccgatcta
ctgaccgacgtcgagttcaaggtgttccagggacccgctacggatccagagggacgcgtt
gcggtactttgtatcccaggtggtgccaagttatctcgcaaacaactagacgaatacgct
aagtatgccaccatctatggtgctaaaggcctagcatggatgaagattaatgatctggat
aaagggctagaggggattcaatctcctgtacttaagttccttagcgaagatgtcgtaaag
ggtctgcttgagcgcaccgatgccaagtccggtgatctgattttattcggcgcagataaa
gcaaacatagtttccgaagcgatgggcgcactgcgcatcaaagccggtgaagattttgac
ctgctaaagggcgattggaaaccactatgggtggttgacttccctatgttcgaacgtaca
tcagatggtggcttgcatgccatgcaccatccatttaccgcgcctagcggcatgacgccg
gagcaactcgaagccgacccgatttcagctatctcagatgcctatgacatggtattaaat
ggctgtgagcttggtggtggttcggtacgtattcataacagtgagatgcaaaccgcagtc
ttccgtattctgggtatcgaagaggaagaggccaatgagaagtttggcttcctgctagaa
gcattgcgttatggtacaccacctcatgccggtctagcctttggtttagatagaatcatc
atgttgatgacaggtacttcctcaattcgtgatgtgatggcattccctaaaaccaccaca
gcggcttgtcccttgaccaatgcaccaggattcgctaatcctgagcaactcgtcgagtta
ggcattgacgtcatcaagagtgaagaagaaaaagaaacaccagagtaa
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