Shewanella violacea: SVI_2401
Help
Entry
SVI_2401 CDS
T01206
Name
(GenBank) soluble lytic murein transglycosylase, putative
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
SVI_2401
Enzymes [BR:
svo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SVI_2401
Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SVI_2401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
BAJ02372
UniProt:
D4ZL23
LinkDB
All DBs
Position
2751351..2753273
Genome browser
AA seq
640 aa
AA seq
DB search
MASSIFNPADASDYTSQQQKYLDARQALKKKQFSTFNRLRKQLDGYPLTVYLDFHSSIDG
ILTHKGSKAIPEINQFKDSPLFNTARYRYLMKAGSNQRWDDFLMVSPSRPNNTILQCYFY
RAKFSAGDKETAFKGAQSLWLYGKSRPQECNSLFQAWQNAGLRTQDKIWSRMFLSFNAGQ
NGLLTYLAKQITSNKSAANLLLSVYKDPRSLRYTKKYMGRASVNGEIVAAGLNKLARKDL
KLAVKLYMTYQKLDRFSDYQGRKLSRYFVKRAIIRQEEQLKSFVDTMLPLLDSDDLVELR
LRWAIREADFTQLIAYLPQLSDQKKAKPRWQYWQARVDSIGSTQTSLAPSSDMFYNHSST
TRLEDLSLRRNFYGYAAAGELNSEYQLEHQDSISDKALRNKLFDDKALARVIELLAIDKT
IDARTEWVQMLARHKPAMQKEYATFALENKWYDLGVQASIQGKLWNDISLRFPYAAQQAF
VKASKKQKVNIDELRAIARRESAFYPYATSGVGARGLMQLMPATAKETARKAGVKYKGTR
SLYVNEINIRLGSAYYASLLKQFNNNRVLATAAYNAGPYRVKRWLKNTNGKLDVVSFIEA
IPFTETREYVQAVLSYRVIYQIKQGKKPELFSAKELNFKY
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctcgatttttaatccagccgatgctagcgactacaccagccagcagcaaaaa
tatttagatgctcgacaagcactgaaaaaaaagcagttcagtacctttaatcggttacgt
aaacaactcgacggctaccctctgaccgtctatctggactttcattccagcatagatggc
attctgactcataaaggctctaaagccatcccagagataaaccaatttaaagatagtccc
ttatttaacacggctcgatatcgctatttaatgaaggccggctccaaccagcgttgggat
gatttcttaatggtcagcccaagcagacccaataacactattttgcagtgttatttctac
cgggctaagttttcagcaggcgataaagagacagcttttaaaggcgctcaatctctctgg
ctctatgggaagtcgagaccacaagaatgtaactcgctctttcaggcatggcaaaacgca
ggcttacgcactcaagacaagatctggtcgcgtatgttcctgagttttaatgccggtcaa
aacggattactgacttatctcgctaagcaaataaccagcaacaaatccgcggctaatcta
ctcctgtcggtatataaagatccacgcagtctcagatacaccaaaaagtatatgggccgg
gcaagcgttaatggtgagatcgtcgccgctggattaaataaactggcgagaaaagatctt
aagctagcagtaaaactctatatgacctaccagaaactggacaggttcagtgattatcaa
ggcagaaaactcagtcgctatttcgtcaagcgcgccatcatcagacaggaagagcaacta
aaatccttcgtcgataccatgttgccactgctagacagtgatgatctggttgaattaaga
ctgagatgggccatcagagaagccgactttactcagctgattgcctacttgccccagttg
agtgatcagaaaaaagctaagcccagatggcaatattggcaggctagggtcgatagcatc
ggctcgactcaaaccagcttggctcccagttcagatatgttctataaccactcgagtacc
actcgattggaggacttaagcctacgcagaaacttttatggttatgccgcggcaggtgag
ctcaatagtgaatatcaactggagcaccaagactccatcagtgacaaggcccttagaaac
aagttattcgatgataaagccttggctcgagtcatagagttactggcaattgataaaacg
attgatgccagaactgagtgggtacagatgttggctcgtcataagcctgcaatgcagaaa
gaatatgcgacatttgcattagagaataaatggtacgatctcggcgtccaagccagcata
caaggcaaactttggaatgacatatcattgcgtttcccttatgcagcccagcaagccttt
gtgaaagcaagtaagaaacagaaggtcaacattgatgaactcagggctatagcaaggaga
gagagtgctttttacccttatgccacctcaggggtcggtgcgagaggcttgatgcagctt
atgcctgcaacggcaaaagaaacagccaggaaagccggggtaaaatacaagggcacacgt
agcctgtacgtcaatgaaattaatattcgcctgggaagtgcttactatgcctctctatta
aagcagtttaataacaatcgagtgttagccaccgcagcatacaatgcgggcccttacaga
gtgaagcgttggttgaagaacaccaatggcaaactggatgtagtctccttcatcgaagcc
atccccttcaccgaaacccgagaatatgtacaggcagtacttagctatcgagtcatctat
caaataaagcaaggaaagaaacccgagttgttctcggccaaggaactcaattttaaatat
tga
DBGET
integrated database retrieval system
