Shewanella violacea: SVI_2516
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Entry
SVI_2516 CDS
T01206
Symbol
pheS
Name
(GenBank) phenylalanyl-tRNA synthetase, alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
svo
Shewanella violacea
Pathway
svo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SVI_2516 (pheS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svo01007
]
SVI_2516 (pheS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_2516 (pheS)
Enzymes [BR:
svo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
SVI_2516 (pheS)
Amino acid related enzymes [BR:
svo01007
]
Aminoacyl-tRNA synthetase
Class II (U)
SVI_2516 (pheS)
Transfer RNA biogenesis [BR:
svo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SVI_2516 (pheS)
Prokaryotic type
SVI_2516 (pheS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
tRNA_synthFbeta
Motif
Other DBs
NCBI-ProteinID:
BAJ02487
UniProt:
D4ZLD8
LinkDB
All DBs
Position
complement(2875890..2876873)
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AA seq
327 aa
AA seq
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MSELTEIVEQALLAVDGASDLKALDELRVEYLGKKGKITDMMKMMGKLSPAEKPAFGQAV
NQAKQAVQQKLSERIEGLKASELEAKLAAESIDVTLPGRRIDNGGLHPVTRTIERIETFF
GELGFSVKQGPEIEDDFHNFDALNISEHHPARADHDTFYFNPKVMLRTQTSGVQIRTMEN
EKPPIRIISPGRVYRNDYDQTHTPMFHQVEGLLVAENVNFAELKGILHDFLRNFFEEDLE
VRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGVDPEIYSGFAFGMGVE
RLSMLRYGVNDLRSFFENDLRFLKQFK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagttaacagagatcgtagaacaggccttgttggccgtcgatggggcgagtgat
cttaaagccctagatgaacttcgtgtcgaatacctaggtaagaaaggtaaaataaccgac
atgatgaagatgatgggtaaactgagcccggctgagaaacccgctttcggtcaagctgtg
aaccaagccaaacaggctgttcagcagaaattatctgagcgtattgaaggcttaaaagcg
tcagagctagaggctaagcttgccgctgaaagtatagatgtgactctgcctggtcgtcga
atcgataacggtgggttacacccggtaacacgtactatcgaacgtattgaaaccttcttt
ggtgagcttggctttagcgttaagcaggggccggaaattgaagatgatttccataacttc
gacgcacttaacatctcagagcatcatcctgctcgtgccgatcatgatacattttacttt
aatcctaaagtcatgttgcgtactcaaacttcaggtgtgcagatccgcaccatggaaaat
gagaagccgcctatacgtatcatctctcctggccgcgtctatcgtaatgattacgatcag
actcacacgcctatgttccatcaggtagaaggtttgttggttgccgagaacgtaaacttt
gccgagctaaaaggcatattgcacgactttttacgtaacttcttcgaggaagatttagaa
gtgcgtttccgtccttcatatttcccattcactgagccatcggccgaagtggatgttatg
ggtaaaaatggtaaatggttggaagttctgggttgtggcatggtacatccaaatgttctg
cgcagtgtcggtgtcgaccctgaaatatactctggttttgcttttggcatgggggttgaa
cgtctatctatgttgcgttacggcgttaacgatctacgttcattttttgaaaatgaccta
cgtttcctcaagcaatttaaataa
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