Shewanella violacea: SVI_2685
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Entry
SVI_2685 CDS
T01206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_2685
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_2685
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BAJ02656
UniProt:
D4ZLV7
LinkDB
All DBs
Position
complement(3049640..3051814)
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AA seq
724 aa
AA seq
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MFTLKSFCSDSTFLKRLSPVALAVSTALISQHALASEPTEAPADEMEVIVVSSDFRGSTL
DKMPSSITVINQQQIEDEGAQHFEDVLNSIANFNWSGGSSRPKYFQIRGVGEQEEYQGAP
NSSVGYIIDDIDMSGLGMISSMYDLQQVEVLRGPQGTRYGANALAGLIYLKSNDPTDVFE
HGAEVSVGDDNLTTFSGFSSGPLTDSGKLLYRVSLQQHQQNGYQDNLYLGRDDTNARDEF
SGRAKLRWYASDDLQIDLTLLHADYDNGYDVWTLDNNGENTQTDAPGVDKQRTTGSSLKF
TYSGAEQFELVSLTSYANSQTHYNYDGDWANPDHWGGLDCDGEACEYDYTWGKKGERNTI
SQEFRLSSTQAGRIFSDSTDWLLGVYGMRLTEDNDTVEDYNGWLDTLNAEYEANNTAVFG
QLDSDLGAGYALSFGLRVERRDSDYSDSAGDKFSPGETMWGGHIALSKALSDSHEAYARI
ARGYKAGGFNMTLPEELSDKKEYDTETLYNYEIGLKSRWLDGDASTNISLFYMDRRDQQV
AASQQNPEEPQKFILFTENAGSSHNYGAELEGDWYATSNLKLYASLGWLETAYGDYSYQD
KYGGTVDLTGRDLAHSPNLTYSAGATYRTDSGWFTNLTTSGKSEFYYSDSNESKSQAYTI
FNARVGYETDVWSAYLWGRNLFDEDYGTRGFYFGNEPDQGWADKQYIRFGDPRQLGLTVN
VKFL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtttacacttaaatctttttgttccgattctaccttcttgaagagactttctccggta
gctctcgcggtatcgaccgcattaatcagccagcacgcactcgcttcagaacccacagag
gcacctgccgatgagatggaagtgatagtggttagctctgattttcgaggctcgacactg
gataaaatgccatcaagcattaccgttatcaaccagcaacagatagaagatgaaggcgca
caacacttcgaagatgtgcttaattctatcgcgaactttaactggtccggcggtagctct
cggcctaaatatttccaaatccgtggtgtcggcgagcaggaggagtaccaaggcgcgccg
aattcatctgtaggttacattatcgatgatatcgacatgtcgggcctgggcatgatttct
agcatgtacgatctgcagcaggtggaagtattgcgcggcccacaaggaacacgatacggt
gccaatgccttagcgggattgatataccttaagagtaatgaccctaccgatgtgtttgag
catggagccgaagtgtcagtgggtgatgataacctcacgacattcagcggatttagctct
ggaccattaaccgattcgggtaaactcctctatcgggtatctctacagcagcatcaacaa
aatggctatcaggataatctctatcttggccgtgatgacaccaatgcccgtgatgagttt
tctggccgagctaaattgcgctggtatgccagcgacgatctacagatagacttaacctta
ctccacgcggattacgataatggttacgatgtatggacactggataacaatggtgaaaat
actcagaccgatgcaccaggcgtcgataagcagcgcactactggtagctcgcttaagttt
acttactcaggtgccgagcagttcgaactcgtgtctttgacatcatatgccaactctcag
actcattataactatgatggtgactgggcaaatcctgatcactggggcgggctcgattgt
gatggcgaggcttgtgaatatgactatacctggggcaagaagggcgagcgaaataccatt
agccaagagtttagactcagctctactcaagctggacgtatcttttccgatagcacagat
tggttactgggcgtttatggtatgcgcttaactgaagacaatgacacagttgaagattac
aacggttggttagatacgcttaatgccgaatatgaagctaataatactgccgtatttggt
caactagattcagatctaggtgcgggttacgccttgtcttttggtctgcgagtagagcgt
cgtgacagtgattacagcgacagtgctggtgataaatttagcccaggtgaaaccatgtgg
ggcggtcatattgccctgagtaaggcacttagcgatagccatgaagcctatgccaggata
gcccgtggctataaggccggtggttttaatatgacattgccagaagagctgtcagataag
aaagagtatgacaccgagaccttatataactatgagatagggcttaagtcacgctggctc
gatggcgacgctagcactaacatctctttgttctacatggatagacgcgatcagcaagtc
gcagcctctcagcaaaacccagaagagccacaaaagtttatcctatttacagagaatgcc
ggtagttcacataactatggtgccgaactcgagggtgactggtatgccacttcaaacctt
aagttatatgccagtctaggctggctagaaacggcctatggcgattattcttatcaagat
aagtacggtgggacagtggatttgacggggcgagatcttgcccattcacctaacttgact
tacagtgccggcgcgacctatcgcaccgattcaggttggttcacaaacctgacaaccagt
ggtaagagtgagttttactactcagatagcaacgaatccaaatcacaggcctataccatc
ttcaatgcccgtgtcggatatgaaacagatgtctggtcagcgtacctatggggccgcaac
ttgttcgatgaagattacggtactcgcggtttctacttcggtaatgagccagatcaaggc
tgggcagacaaacaatatatacgctttggtgatccacgccagttgggtttgactgttaac
gtcaagtttctctaa
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