Shewanella violacea: SVI_2935
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Entry
SVI_2935 CDS
T01206
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_2935
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_2935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
MipA
Porin_4
Motif
Other DBs
NCBI-ProteinID:
BAJ02906
UniProt:
D4ZMK7
LinkDB
All DBs
Position
complement(3324443..3325450)
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AA seq
335 aa
AA seq
DB search
MAQANQVKTHEASKVQDDSFFYLGAKGGWINYQNACEAQAVDCDANDSAWGGFAGYQFHR
NWAVETGYNDFGQAGAVYPESGLLNEYIGTMKGWEFSLKGNLPLTENLDLFGKAGTLRWD
GENSGPFSYDSDDGWSPMVGIGLEYKLTPSWVARVEYQYFDSVGSDKLGGSNMHFTSLGL
SYRFGQTKPVAKSVTQPAPVAVEQVVVVASPMVIPAMTNAVHFDFDSEVPLQTHILVEVA
RHLNQYPSASVVLQGYTDAVGPSGYNLKLSKRRAVSVAAYLKKLEVSDAQISIEALGETH
PELDNITEEHRANNRRVYISIPEITVNPESTDSAQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagctaatcaggttaagacccatgaggcgtcaaaggtacaagatgacagtttc
ttttatcttggtgctaaaggcggttggattaactaccaaaatgcttgtgaagctcaagct
gtcgattgtgatgcaaacgactcggcctggggcgggtttgcgggttatcaatttcatcga
aattgggcagtagagactggctataatgactttggtcaggctggggcagtttaccctgag
agtggactacttaatgaatatataggcaccatgaaaggttgggagttttcattgaaaggc
aatctgccactcacagaaaacctagacctgtttggtaaagcggggacattaagatgggat
ggcgaaaactcagggccattttcatatgacagcgacgatggctggtctcccatggtaggc
ataggattggaatataagctaacaccgtcttgggttgcgcgtgttgagtatcaatatttc
gactcggttggcagcgacaagcttggggggagtaatatgcacttcaccagtttaggactc
agctatcgtttcggccagactaaaccagtggctaaatctgtgactcagccagcaccagtt
gctgtggagcaggttgtcgtagtagcaagcccaatggttatccctgcaatgactaatgca
gtacatttcgatttcgacagtgaagtccccttacagactcatatcttggttgaagtcgct
aggcatctgaatcaatatccaagtgcctcggttgtgcttcaaggttacaccgatgcagtt
ggtccttcaggctataacctgaaactttcaaaacgacgtgcagtgtctgttgcagcttac
cttaaaaaacttgaggtcagtgatgcacagataagcatcgaagctttaggtgagacccat
cccgagctagataacatcaccgaagagcacagagccaataatcgccgggtatatatctct
atcccggagatcacagtgaacccagagagtactgattcggctcaatga
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