KEGG   Shewanella violacea: SVI_2972
Entry
SVI_2972          CDS       T01206                                 
Symbol
polB
Name
(GenBank) DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svo03400]
    SVI_2972 (polB)
Enzymes [BR:svo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SVI_2972 (polB)
DNA repair and recombination proteins [BR:svo03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    SVI_2972 (polB)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNA_pol_B_2 POL2_thumb
Other DBs
NCBI-ProteinID: BAJ02943
UniProt: D4ZA98
LinkDB
Position
complement(3366851..3369286)
AA seq 811 aa
MPVKPPSESRVTSSIKGRILSRHTVQHSGMTWLHYYIKTSDGPRLVKVPQAEYLCFCATK
DLPRLQGLPQSAKLRIVDLPLKNFNCDPVTAIYASSLQVFRLVNRGAVDLGIPLFETDIR
PEHRYLIERYIALDVEFIGQFEPQVQGHLASFTASRARKSAVDIRLKAISLDFECSMSGE
LYSVGLYAKETDDEYKKVIMVGSPNPSNRDNSSLSADQVDYIEWVADERGLILKLIDWFA
EYDPDIIIGWAVVTFDLALVYRRAKLLGIALTLGRGGTVLSWKVADKYRPETLSLPGRVV
LDGIDWLKAAFYRFDSFSLESVSRALLEEGKALPSGPKGILNRGEEITELFHQDKAALAH
YNLTDSRLVWDVFKKAQLFEFALERSRLTGLELGRVGASVAAFNNLYLPHLHRAGFVAPA
MATSQGLESPGGYVMNSIPGLYKHILVLDFKSLYPSIIRTFLIDPKGLVKGLSESEADNV
DGFLGAKFSRDSPILPELIKTLSAHREEAKRENNAPLSQAIKIIMNSLYGVLGSRGCVFH
DARLASSITLRGHQIMKQTRAWIEELGYQVIYGDTDSTFVWLGLDPEDTDVDKIGGGLVK
TINAKWKNKLAKEMKLDSHLELEFECHYEQFFMPTLRGSTEGSKKRYVGAITNNEGELQL
IFKGMEQVRSDWSPLARRIQEALYYRLFSKKDVMVFLQEVVNDLMQGKLDEELIFSKRLR
RDIADYTAKSSPHVKAAKMMCDFSGSERFSKRGTKVEYLMTLNGAEPIQYRQSAIDYYYY
LTKQLAPIAEPVLGLLNKRFSDIASKQMSLI
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgccagtaaaacccccatcagagtctagggtcacttcatcgatcaaggggcgaatactt
tctcgtcatacggtgcagcattcgggtatgacttggttgcattactatattaaaacctcc
gatggccctagattagttaaagtgccccaagctgaatatctgtgtttctgtgcaacgaaa
gatctgcctcggctgcaaggattaccccagtcagcaaaactaagaatagtggatctgccg
cttaaaaatttcaattgtgatcctgtcacggcaatttacgccagttctttacaagtattt
agattggtgaacagaggagctgtggatctaggtattcctctgtttgaaaccgatattcgt
ccagagcacagatacttgatagagagatatatagcgctagatgtggagtttattggacaa
tttgagccccaagtacaaggccatctggccagtttcaccgcttcacgggcgagaaaaagt
gctgtggatatcagactcaaagccatatccctagatttcgaatgcagtatgtccggtgag
ctttattcggttggcctctacgccaaggagacggatgatgaatataagaaggtgatcatg
gtgggctcacctaatccgagtaaccgtgataattcgtctttatctgctgatcaagtggac
tatatcgaatgggtagcagatgagagagggcttatcctcaagttaatcgattggtttgct
gaatatgatcccgacattattatcggttgggcggtggtgacgttcgatctggctctagta
tatagaagagcaaaactacttgggatcgcactgacattgggcaggggagggacggttctg
agttggaaggtggcagataaataccgtcctgaaactctttcgctaccaggtagagttgtg
ctagacggaatagactggctcaaggcggctttttaccggttcgatagtttctcactagag
tcggtttcacgtgctttgctcgaagagggcaaggcattgcctagcggcccaaaggggatc
ttaaaccgaggggaggagatcactgagctatttcatcaggataaagcagcgctcgctcac
tataatttaaccgatagtcgcctagtgtgggatgtttttaagaaagcacaattgttcgaa
tttgccttagagagatctaggcttactgggttagaactcggtagagtcggcgcttcagtg
gcagcattcaataacttatacctgcctcacctgcatagggctggtttcgttgcccccgcg
atggcgacgagtcaagggctagaaagccctggtggctatgtgatgaattctatccccgga
ctctataaacatattttagtgctcgattttaagagcctttacccttcgattatcagaacc
tttctcatcgatcccaaaggccttgttaaggggctatctgagtctgaagccgacaatgtc
gatggttttttgggagcaaaatttagccgggactctcccatattacccgaacttatcaaa
acactctcagcccatagggaagaagcgaagcgcgaaaataatgcaccactgtcacaggcc
attaagataatcatgaactctctttatggcgtattaggctcccgtggttgtgtgtttcat
gatgccaggcttgctagctcaattaccctcaggggtcatcagataatgaaacagactagg
gcttggattgaggagcttggttatcaggtcatctatggcgataccgattcgacctttgtc
tggttgggtctagatcctgaggataccgatgtggataagataggtggagggctcgtcaaa
acgattaacgctaaatggaaaaataagttagctaaagagatgaagctagatagtcattta
gagctggagtttgaatgtcattatgagcaatttttcatgccgactctcagaggctctact
gaaggatctaaaaaacgctatgttggggccattaccaataacgaaggagaactgcagcta
atctttaagggaatggagcaagtgcgcagtgactggagcccgttggccagacgcatacaa
gaagcactgtattatcgtttattctctaaaaaagatgtcatggtctttttacaagaggtg
gtcaatgatctgatgcaaggtaagttagatgaagaacttattttcagtaaacgtttacgc
agagatatcgcagattataccgctaagtcatctccccacgtaaaagcggctaaaatgatg
tgtgatttttcaggatctgagcgattctcaaagaggggaaccaaggttgagtaccttatg
acactcaatggtgctgaaccgattcagtatcgtcagtctgctatcgattattattactat
ctaactaaacaacttgcccctatcgccgaacctgttttagggctgcttaataaacgtttc
tctgatattgcttctaaacagatgtcgttaatttag

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