Shewanella violacea: SVI_2979
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Entry
SVI_2979 CDS
T01206
Symbol
mdeA
Name
(GenBank) methionine gamma-lyase
KO
K01761
methionine-gamma-lyase [EC:
4.4.1.11
]
Organism
svo
Shewanella violacea
Pathway
svo00270
Cysteine and methionine metabolism
svo00450
Selenocompound metabolism
svo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SVI_2979 (mdeA)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SVI_2979 (mdeA)
Enzymes [BR:
svo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.11 methionine gamma-lyase
SVI_2979 (mdeA)
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GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
SelA
GDC-P
Met_gamma_lyase
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAJ02950
UniProt:
D4ZAA5
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Position
complement(3375381..3376559)
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AA seq
392 aa
AA seq
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MQEKWKLATQVIHAGHIKDSSGALVTPLCQSATFVFDSAQQGGARFAGDEPGYIYTRLGN
PTTAELERKMARLEGAEAAAATASGMAAVSSALLANLSQGDHLVASKAVYGCTFSLMSTQ
LSKFGIEVSLVDFKDLDAISAAITNKTKVLFCETPVNPHLDVFDLDALVSIARKHGLISI
IDNTFMTPLLQQPLAHGVDLVVHSATKYLNGHGDVIAGIICGSNEQIEKIKFETMKDLGG
VLSPHDAWLILRGLKTLDVRMERHCDNAQRVVEYLLSHPKVVKVYYPGIEGSYGQHLLGK
QMRRGGGVIAFELDADLDKSIEFINSLQLFSIAVSLGDAESLIQHPASMTHATYDKEERE
AAGIGENLLRISVGLESVEDLIVDLDQGLAQI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaagtggaaactggcaacgcaagttatacatgctgggcatattaaagacagt
tcaggggcactggtaacccccttgtgccagagtgcaactttcgtattcgatagtgcacag
cagggaggtgctaggtttgctggcgatgagccaggttatatctatactcgactcggtaac
ccaaccacggctgagttagagcgcaagatggctcggcttgaaggggctgaagcggctgct
gctacggcatcaggtatggcggcggtttcttcagcgctgctggctaatctttcacaaggc
gatcatctggttgcttccaaggccgtatatggctgtactttctcactgatgagcacacag
ttgagcaagtttggtattgaggtgtccttggttgattttaaggatctcgatgcgatttct
gcagcgataaccaacaagaccaaagtacttttctgtgagacaccagttaatcctcatctc
gatgtttttgatttagatgcactggtgtcaattgcacgcaagcatggtttgatcagcatc
atagacaatacgttcatgaccccattgttgcagcaacctttggctcacggagtcgatctt
gttgttcacagtgccactaagtacctcaatggacacggcgatgtcattgccggaataatc
tgtggcagtaatgagcagatagagaagataaaattcgaaaccatgaaagacttaggcgga
gtcttgtctccccatgatgcctggttgattctgcgaggactaaaaaccttagatgtcaga
atggaacgtcattgtgataacgcccagagagtggtggaatacctgttatctcatcctaaa
gtggttaaggtgtattaccctggaatcgagggaagctatggtcagcacctactcggtaag
cagatgcgcaggggcggtggagtgatcgcttttgagcttgatgcagacttagataagtcc
atcgagtttatcaatagcctgcaactattttccatcgcagtgagtctaggagatgccgag
tctttaatacaacatccagcttcaatgactcatgctacctatgataaagaggagcgggaa
gctgcgggtattggtgagaatctgttgcgtatctctgtggggctagaatcagtcgaagac
cttattgtcgacttagatcaaggcttggctcagatttag
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