Shewanella violacea: SVI_2987
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Entry
SVI_2987 CDS
T01206
Symbol
sapB
Name
(GenBank) peptide ABC transporter, permease protein
KO
K19227
cationic peptide transport system permease protein
Organism
svo
Shewanella violacea
Pathway
svo01503
Cationic antimicrobial peptide (CAMP) resistance
svo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SVI_2987 (sapB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SVI_2987 (sapB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_2987 (sapB)
Transporters [BR:
svo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
SVI_2987 (sapB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
BAJ02958
UniProt:
D4ZAB3
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All DBs
Position
3383749..3384780
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AA seq
343 aa
AA seq
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MTRYLLRRMNLFVATSLVLLAVLFIATHHFPVEKRFALTGIHAPTAEQIASINQDYRLDS
NHLGQFIGYLQQRLSGNLGISATSQQPITDELATVLPASFELAIVAAVLALFFGIPLGIL
ASMSKNKITQHTIMLITLTGYSIPVFWLGLTLSLWFGVQLGWLPISGQLNLLYEIESVTG
FVLIDTLLSDSLYADSAFIDALHHIILPAITLAVLPFTVVVRSTRSAIIAIMDKTYIKAA
EARGLHTSHIVLRHALPNALIPVLKNLGLMLGSFASYAMVVEVIFSWPGVGAWLVSGIYQ
RDYTVIQGGVLAVALIIIFLSIMIEVLHTAINPLSRKELYAAN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgactcggtatcttttacgtagaatgaacctgttcgtcgccacatccttggtgctgctc
gcggtgctgtttatcgccacacaccacttccccgtggagaagcggtttgcactaacggga
atacatgccccaacagccgaacagatagcaagcatcaatcaagattatcgactagacagc
aatcatttaggtcagtttattggatatcttcagcagagattaagtggtaatttggggatc
tcagcaacatcacagcagccaataaccgatgaattagcgactgtcttacctgcatcattc
gagttggcgattgtcgccgctgtgttagcactttttttcggtattcccctgggtattttg
gcctcgatgagtaagaataagatcacccaacacaccataatgttgatcaccttaactggt
tactctattcctgttttttggctaggtttaaccttgtcactctggtttggtgtacagctg
ggttggctgcccatctcaggccagcttaacttgctctatgagattgagtctgtcacagga
tttgtgctgattgacaccttactttcagattctctttatgctgactcagcctttatcgat
gccctgcaccatatcatcttaccagccatcactctcgccgtgctcccatttacagtcgtg
gtaagaagcacgcgttcggcaatcatagccatcatggataagacttacattaaggctgcg
gaggccagagggctacataccagccacatagtgttacgtcatgcccttcccaacgccttg
atacctgtgctgaagaatctcggcctcatgctaggctcttttgctagctacgccatggtg
gttgaagtcatcttctcctggccaggtgtaggagcctggttagtctcggggatctatcaa
agagattacactgtgattcaaggcggggtgttggcggttgccttgatcatcatattttta
agtatcatgattgaggtccttcacacggcaatcaatcctctaagtaggaaagagctttat
gccgcaaattaa
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