Shewanella violacea: SVI_2989
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Entry
SVI_2989 CDS
T01206
Symbol
sapD
Name
(GenBank) peptide ABC transporter, ATP-binding protein
KO
K19229
cationic peptide transport system ATP-binding protein
Organism
svo
Shewanella violacea
Pathway
svo01503
Cationic antimicrobial peptide (CAMP) resistance
svo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SVI_2989 (sapD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SVI_2989 (sapD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_2989 (sapD)
Transporters [BR:
svo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
SVI_2989 (sapD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
DUF3368
Motif
Other DBs
NCBI-ProteinID:
BAJ02960
UniProt:
D4ZAB5
LinkDB
All DBs
Position
3385673..3386686
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AA seq
337 aa
AA seq
DB search
MPLLDIRNLTIELDTPHGRVKALDRVSLTINPAEIHGLVGESGSGRSLLARAILGIPGHN
WTIKADRMLWDGHNLLEMSSKQRRNLMGSEISMIFQDPSGSLDPVICVGTQLVEAMPENK
KLPFWRRTADKKKTAKKWLHKVGIKDTQKIMASYAWELSEGECQKVMIAMAIANQPRLLI
ADEPTNSMEMDTQAQIFRLLTKLNQLQSVSILLISHELETLSIWCDKLSVMYCGQIMESG
PTADILAHPYHPYTKALLNNIPDHTGRIAHKSIMRTLPGSAPALQHLPIGCRLGPRCPRA
EKKCVSRPNLSHKKNRYFACHFPYHEETCNEDTTASS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgccattactcgacattcgtaacctcaccatagaactcgacactcctcacggacgcgtc
aaggcactagatagagtcagtttgactattaatccagcagagattcatggcttagttgga
gaatccggttccggccgaagtttattagctagagctatcttgggcataccaggccataac
tggaccatcaaagccgatcgcatgttgtgggatgggcacaacctattagagatgagctcc
aagcagcgacgcaacctgatgggtagcgaaatatccatgatattccaagatccgtctggt
agcctagacccggttatttgtgttggaactcaacttgttgaggccatgcccgaaaataag
aaattgcctttctggcgacgcactgccgataagaagaagaccgccaagaaatggctgcat
aaagtgggcattaaagacacacagaaaatcatggccagctatgcctgggaattatcggaa
ggtgaatgtcaaaaagtcatgatagccatggcgattgccaaccaacctaggttattaata
gccgatgagccgactaactcaatggagatggacacacaagcgcagatctttcgcctcttg
actaagttaaaccagctacagagtgtatccattctgctgataagtcatgagctcgaaacc
ttatcaatctggtgtgataagctatctgtgatgtattgtgggcaaataatggaatcaggc
cccacggctgacatattagcgcacccctatcatccatacactaaagcactgcttaataat
attccggaccacacggggcgaatcgctcataaatctatcatgcgtactctgccaggctca
gccccggcactgcagcatcttcccataggttgccgactcggtcccaggtgcccacgggcc
gaaaagaaatgtgtgagtcgtcctaatttaagtcataaaaagaatcggtattttgcctgt
catttcccttaccatgaagaaacatgtaatgaagacaccactgcttcaagttaa
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