Shewanella violacea: SVI_2992
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Entry
SVI_2992 CDS
T01206
Name
(GenBank) pentapeptide repeat family protein
Organism
svo
Shewanella violacea
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Gene cluster
GFIT
Motif
Pfam:
Pentapeptide
Pentapeptide_4
Pentapeptide_3
Motif
Other DBs
NCBI-ProteinID:
BAJ02963
UniProt:
D4ZAB8
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Position
complement(3389441..3391435)
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AA seq
664 aa
AA seq
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MFSIIFVTACDSNDNDTQIQSDLLTEKDFANNSRLRANPEQGVVALFLEPPSATVEDDSN
GKSGSDLIPYQYSRTLNHTFCYEDGNSNSNHSMVLNNSSGEEVLSITANDECVSAVIPAG
EYQLVLTHGQHVDSTDTSFLVTTPDSGSLPEVNSVNYSIVSKLLTTIGNALISPAYADTA
DDNVTTLISTNACKNCDLSGVDLDNATLTFADLSGADLSDAILTNVDLFESTLTGTNFSG
ADMSKGDFRGSEMTYADLSNANLSGAYFSSAQLSPADLDKATVTDTDFDYANLVGATWID
GGICDITSVGFCNPTAVAESDPCDSVKQDVTYDGNTVYKCLLPAVDKEVCTTEYGGVDGA
TPITSCEAKDNSELVTSVNLVDIFSQVSSSFDTTLDNDTPMAILAWGGEGGIGSSGGLWT
SGGDGGKSGFASTVTTLSHFLDNYGQTSFTFFIGENGTLSNIYGDGGSSTLVMIAESSPA
SLEDDVILIAGGGGGGDSSGWLNDGTDGGDGGVAASSIIGQGTIGVGQAIISVSDGGSTD
EWGNGGNGANDGKDGIGGQGGQGFLGANSEWVNGDPGVDSDGRGGNADDSFSASGGGGGG
GGYGGGGAGDDGAGAGGGSWSIIPATTCNSAPTQDTAPSNPGSSGDDFGSKNGAVEVWIF
PKGC
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttttctatcattttcgtgacagcttgtgatagcaacgacaatgatactcaaatacaa
tcagaccttttaaccgaaaaggactttgcgaataatagtcgcttacgtgccaaccctgaa
cagggtgtcgttgccttatttcttgagccaccctcggcaactgtagaggatgactctaac
ggcaaatcaggctctgacctcataccctaccaatattcgcgtaccctaaatcatacattt
tgctatgaagatggtaacagcaattcaaatcactctatggtgctcaacaatagtagtggc
gaggaagtgcttagcattacagccaatgatgagtgcgtatcggcagtaatacctgcgggg
gaatatcagctggtactgacccacggtcagcacgtagatagcacagatactagcttctta
gtgacgacgcctgatagtggttcgctgccagaagtaaatagcgttaattattcgattgtt
tccaaactactgactaccattggcaatgccctgataagcccagcttatgcagacactgca
gatgataatgtgactacgcttatttccacaaacgcatgtaagaattgtgatttgtcaggc
gtagacttggataatgcaacactcacatttgcagatctttccggcgctgatttaagtgat
gccatattaaccaatgtcgaccttttcgaatcaacgctcacaggaaccaactttagtggt
gccgatatgagcaagggggactttcgtggttcggaaatgacgtatgcagatcttagtaat
gccaacctgagtggggcttatttttccagcgctcaattatcacctgcggaccttgataaa
gcgactgtcacggatacagattttgattacgccaatctcgttggcgcgacctggatagac
ggaggcatttgcgatattacctctgttggcttttgtaatccaacagccgttgccgagtca
gacccgtgcgattctgttaagcaggatgttacctatgatggcaacaccgtctataaatgt
ttattgccagccgttgataaggaagtttgtaccacagagtatggtggtgttgatggtgcc
acgccaataacaagctgcgaagcaaaagataattcagagctggttacgtctgttaatctt
gttgatatcttcagccaggttagctcatcctttgacaccacgctggacaacgacactccc
atggccattttagcctgggggggagaaggtggcattggttctagtggtggactctggacc
tctggtggtgacggcggtaagagcggttttgcatcgacagtcacaacgttatctcatttc
ctagacaattatgggcaaacatcattcactttcttcatcggcgaaaatggcactctgagt
aatatctatggtgacggaggctcctccacactggtcatgattgcagaaagtagcccagct
tcacttgaagacgatgtcatacttattgccggtggtggcggtggcggggactcttctgga
tggcttaacgatggcactgatggcggtgatggtggcgttgcggcctcatcaatcataggt
cagggaaccattggcgtaggccaagccattattagtgtatccgacggtggcagcacggat
gaatgggggaatggtggaaatggcgccaatgacggcaaagatggcattggtggtcaaggc
ggacaagggtttttaggggctaatagtgaatgggtaaatggcgatcctggggtcgactct
gacggcaggggcggcaatgcagatgatagctttagcgcttctggcggcggtggcggcgga
ggtggttatggtggcggtggcgctggcgatgatggagctggagccggtggcggaagctgg
tccataatccctgccaccacctgtaatagcgcgcccactcaagatacggcaccttcaaac
cctggttcatcaggtgatgactttggcagtaaaaatggcgctgttgaagtttggatattt
ccaaagggctgttaa
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