Shewanella violacea: SVI_3060
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Entry
SVI_3060 CDS
T01206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_3060
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_3060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BAJ03031
UniProt:
D4ZAI6
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Position
3468200..3470383
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AA seq
727 aa
AA seq
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MTILLHTGPPMSFSLSQTAIATRCALLCLALPSLSVLADDNARSPADSSMERMIITGSRS
VERIDEVPSSVTLIDKKMLKQDMLISSELQNILAFRVPGMAPSSGTSSNSGQTLRGRKAL
IMIDGVPQSTPLRNGQLGIRSIDAGAIERIEVIKGATSIYGNGASGGIINYITKKASSDD
KARIQLGASSKFSAVKFEDTPGYRFDASIDGTIDKFSYVLTGAMEETGLQRDSQGDVIGL
KYGLSESKSKNLFTKLGYAFDEEKYLQLTYNYYDAQQKTDYVDVVGSVNSGVKTYAIKDT
SGAPKLGVPQGPRGNHNLMLKYVDEEIFSNTQLTLDGYAQVIENMFFYSTRLSNPSAGYA
GGQSLIKSDKKGIRVNFNTQLDWDNVEVSFIYGLDALNDVSSQPLDDGRIWVPEMDMTNL
AAYLQTKIVIDGDWIIKAGVRQDSVDLSVDDYQTLKVCKSADTCSVPMDVKGGDIDYDTT
TFNVGVRYNMNDYFSPFISFSQGSDISDLGRLLRTATVDDISLIRTEASIVDNYEVGVSG
QVADLTYEFAAYRSNSELGTGSKYIVETGVYMPVREPQKIWGYEAQLSYQIQENLTSSVS
YSWIEGKNTETDTYLDGKTISAPKFTATLDWQPIEEVRIGVNYLYVGDRKRFEPVDGKYV
GTLGPVSSYNLVNLSSSYQIDNWQLSLGIENLLNQDYYSARSQAYTYSGYNTKGLGTTVN
LGVKTSF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacaattttattacacactggacccccaatgtcattttcacttagccaaacggccatt
gccactcgatgtgcactgctttgcctcgcgcttccctcactctccgtattagccgatgat
aacgctcgctccccagccgatagctccatggagcgtatgattatcactggaagtcgtagt
gtcgaacgcatagatgaagtgccatcttcggtcaccttgatcgacaaaaagatgcttaaa
caagatatgttaatcagctcagagctgcagaatatactggcatttcgcgtaccgggaatg
gcaccaagctcaggcacctccagtaattctggacaaacattgcgtggccgaaaagcactg
atcatgatcgatggggtaccacagtcaacaccactgagaaatggccagttaggcattcgt
tcaatagatgctggcgccatagagcgtatagaagtgatcaagggggcaacctcaatttat
ggtaatggcgcctcgggtggcatcattaactacatcaccaagaaggcaagtagtgatgat
aaagccagaatccagctaggcgcatcgagcaaattcagcgctgtaaagttcgaagacacc
ccgggctaccgtttcgatgcatccatagacgggactatcgataaattcagctatgtatta
acgggggcgatggaagaaaccggtttacaacgcgattcacaaggcgatgtgataggcctt
aaatacggattatcagagagtaaatcgaagaatctattcactaaactcggctatgctttc
gatgaagaaaagtatctgcagctgacctataactattacgatgctcaacagaaaaccgat
tatgtggacgtggttggcagcgtcaatagcggcgttaaaacctatgccatcaaggatact
tctggagccccaaaactgggggtacctcagggtccccgcggtaatcacaacttaatgctg
aaatatgtggatgaagagatcttcagtaacactcaactcacactcgatggttatgctcag
gtcatcgaaaacatgttcttctattccacacgactatcgaacccaagtgcaggttacgct
ggcggacaatctctgattaaatccgataagaaagggattcgggtcaacttcaacactcag
ctagactgggataatgtcgaggtcagtttcatctatggactggatgcactcaatgatgtc
agctcccaacctctggatgacggtcggatctgggtgcctgaaatggacatgaccaatttg
gccgcctacctacagaccaagatagtgatagatggagattggattattaaggcgggagtt
cgtcaagacagtgtcgatctcagcgtcgatgactaccagacactgaaagtgtgcaaaagt
gccgatacctgctcggtacctatggatgttaaggggggtgatattgattatgacaccacc
accttcaatgtcggcgtcagatacaatatgaatgactatttcagcccatttatcagcttc
tcccagggctctgacatctcagatcttggccgcttactgcgtaccgccactgtcgatgat
atatcgcttattcgtacagaggcctcaatagtcgacaactacgaagtcggtgtgtcgggg
caagttgccgatttaacctatgaatttgccgcctatcgcagcaactcagagctaggcaca
ggcagtaaatatatcgttgagactggtgtttacatgcctgttcgtgagccacaaaaaata
tggggatacgaagctcagcttagctatcagatacaagaaaacttaacctccagtgtcagc
tacagctggatagaaggtaaaaataccgaaactgatacctatctcgatggtaagacaatc
tctgcacctaagttcacagcgacactggactggcagccaatagaagaagttagaatcggt
gttaactatctttatgttggtgaccgtaaacgcttcgagcctgtagatggtaaatatgtc
ggtacactcgggccagtgagtagctataacctagtgaacttgagcagcagttaccagatc
gacaactggcagctgtctctgggaattgaaaacctactgaaccaagattactactcggct
cgctctcaggcttatacctattcaggctataacaccaaaggtttaggcaccacagtaaat
cttggcgttaaaaccagcttctga
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