Shewanella violacea: SVI_3165
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Entry
SVI_3165 CDS
T01206
Symbol
recA
Name
(GenBank) recA protein
KO
K03553
recombination protein RecA
Organism
svo
Shewanella violacea
Pathway
svo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SVI_3165 (recA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svo03400
]
SVI_3165 (recA)
DNA repair and recombination proteins [BR:
svo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SVI_3165 (recA)
RecFOR pathway proteins
SVI_3165 (recA)
TLS (translesion DNA synthesis) factors
Other SOS response factors
SVI_3165 (recA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecA_N
RecA_C
Rad51
ATPase
MT3502_N
AAA_25
AAA_24
ATPase_2
AAA_16
PAXNEB
AAA_22
CbiA
CobU
AAA_35
MobB
AAA_14
AAA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAJ03136
UniProt:
D4ZAU1
LinkDB
All DBs
Position
complement(3586610..3587668)
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AA seq
352 aa
AA seq
DB search
MKIDANKEKALNAVLSQIEKQFGKGSIMKLGENRSMDVETISTGSLSLDVALGAGGLPLG
RIVEIYGPESSGKTTLTLEVIAAAQRQGRVCAFIDAEHALDPIYAKKLGVDIDNLLCSQP
DTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
GNLKQTNTMLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKDRDEVIG
NETRVKVVKNKIAAPFKQAEFQILYGKGINRTGELVDLGVIHKLVEKAGAWYSYKGNKIG
QGRANAGKYLTEHPEISAEIETTLRGMLLASPDAAESAAGDENVDLETGEVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgatgcgaacaaagagaaagcactgaatgccgttttaagtcagatcgagaaa
cagttcggtaaaggctctatcatgaaactgggcgagaaccgctcgatggatgttgagacc
atctctacgggatcactttctttagatgtagcactgggtgccggcggacttcctttagga
cgtatcgttgagatttatggaccagaatcttctggtaagacaacactgaccctagaggtc
attgctgctgcacaacgccaaggtagagtgtgtgcctttatcgatgcagagcatgcctta
gaccctatatatgctaaaaagctaggtgtagatattgataacctactttgttctcaacca
gatacgggtgagcaagcgttagagatttgtgatgccttgactcgttcaggtgctgttgat
gtcatcgttgtcgattcggttgcggctttaacgccgaaagctgagattgaaggtgaaatt
ggtgattcacatatgggacttgctgctcgtatgatgagccaggcgatgcgtaagctcgct
ggtaacctgaagcaaaccaataccatgcttatctttatcaaccagatccgtatgaagatt
ggtgtcatgttcggtaaccctgaaaccaccacaggtggtaacgcacttaagttttatgct
tctgttcgcctcgatattcgccgtatcggtgcaatcaaagatcgtgacgaagttatcggt
aacgagactcgcgttaaagtggttaagaacaagatcgcagcaccatttaaacaggcggaa
ttccaaattctttatggcaaaggcatcaaccgtacgggtgaactcgtcgaccttggtgtg
atacataaattagtagagaaagcgggtgcttggtacagctataaaggcaataaaataggc
cagggccgtgcaaatgcaggtaagtacttaactgaacatcctgaaatttctgctgaaatc
gaaactacactgcgtggtatgttactcgcatctcccgatgcggctgagtcagctgcaggt
gatgagaatgttgacctcgagactggtgaagtattctag
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