Shewanella violacea: SVI_3168
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Entry
SVI_3168 CDS
T01206
Symbol
nlpD
Name
(GenBank) lipoprotein NlpD
KO
K06194
lipoprotein NlpD
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
SVI_3168 (nlpD)
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GFIT
Motif
Pfam:
Peptidase_M23
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
BAJ03139
UniProt:
D4ZAU4
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Position
complement(3592022..3593005)
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AA seq
327 aa
AA seq
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MSFRFRYLFGFISGRCAVLLGIFLITGLKMSCNYLFLLALCICFVGCSFQSDRPAPVVNV
TTPVTASYNKGSLKSNSYLVKKGDTLYSIAWASNNDFVDLAKKNKLKRPFIIYPGQKLNL
NLTLTVTNSQTAKTVSPPPSKVVSTKPKEVVKHTHTPVVVASKPHKVHEKKPLDPVKDSA
YSVTTSQQVVNKPIHRPTSQLPAKVSKWFWPVRGKLIGRFSANEQGNKGIKIAGKRGDII
KSAADGRVVYAGSALRGYGNLVIIKHSDNFLSAYAHADKILVKEKQFVSVGQTLATMGNT
GTDRVMLHFEIRYHGKSVDPLKYLPKQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtttcgtttcagatatttatttggttttatatcaggccgctgtgctgtcttgttg
gggatattcttgattactggtttgaagatgagttgcaattatctatttctattagcgcta
tgcatttgcttcgtaggctgtagttttcagtcggatagacccgctcccgtggttaatgtc
acgacacccgtcacggctagctataataaaggctcattaaaatccaattcttatctcgtt
aagaaaggggatactctctattctattgcctgggcatcaaacaatgactttgttgattta
gctaagaaaaacaagctaaaaagaccatttattatttatcctggacagaagctaaatctt
aatttgacacttactgttacaaatagccaaacggctaaaacagtgtccccacccccatct
aaagtcgtatctaccaagcctaaagaggttgtaaaacatacacatacccctgtggtggtg
gcaagtaaaccccataaagtgcatgaaaagaaacctcttgatccggtcaaagactctgcg
tattctgtaacgactagtcaacaagttgttaacaagcctatccacaggccgacgagtcag
cttccagctaaagtgagcaagtggttctggcccgtgagaggtaagttgattggacgattc
tctgctaacgagcaaggaaacaaaggtattaagatcgcaggcaaacgaggtgatataatt
aagtctgcagccgatggtcgtgtagtttatgcgggcagtgcccttagagggtatggaaat
ttagtcatcattaaacatagtgacaattttctcagcgcctatgcacatgccgacaagatc
ttagtcaaagaaaaacagtttgtctctgttggacaaacgctcgcaacaatgggtaatacg
ggtaccgatcgggtcatgttacattttgaaatccgatatcacgggaaatctgttgaccca
cttaaatatttacctaaacaatga
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