Shewanella violacea: SVI_3172
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Entry
SVI_3172 CDS
T01206
Symbol
ispF
Name
(GenBank) 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
svo
Shewanella violacea
Pathway
svo00900
Terpenoid backbone biosynthesis
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SVI_3172 (ispF)
Enzymes [BR:
svo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SVI_3172 (ispF)
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Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
BAJ03143
UniProt:
D4ZAU8
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All DBs
Position
complement(3595671..3596156)
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AA seq
161 aa
AA seq
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MNIRIGHGFDVHKFGGDAPLLLGGVHVPYELGLIAHSDGDVVLHAISDAILGSVALGDIG
KHFPDTDEEFKGADSRHLLRHCYKLARDKGFELGNLDVTIIAQVPKMAPHIEAIREVLSQ
DLESNIDKINVKATTTEKLGFTGRKEGIAVEAVVLVTKIVV
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacgcataggccatggttttgacgtacataaatttggtggtgatgccccatta
ttgttaggtggtgtgcatgtcccctacgagttaggcttaattgcacactcagatggcgat
gttgtgttacacgcaatatccgatgctatcttaggctcagtcgccttaggggatatcggc
aaacactttcccgataccgatgaagaattcaagggagccgacagtcgtcatcttttgcgc
cattgctacaagttggcaagggataaaggcttcgagcttggcaatttggatgtcaccatc
atagctcaagtacccaaaatggcgcctcatatagaagccatacgtgaagtgctaagccaa
gacttagagagcaacatagacaagatcaatgttaaggcgaccacgaccgagaagctaggt
tttacaggtcgtaaagaaggcattgccgtcgaagccgtcgtattggtaactaagatagtc
gtataa
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