Shewanella violacea: SVI_3211
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Entry
SVI_3211 CDS
T01206
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_3211
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_3211
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OprF
Motif
Other DBs
NCBI-ProteinID:
BAJ03182
UniProt:
D4ZAY7
LinkDB
All DBs
Position
3636120..3638234
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AA seq
704 aa
AA seq
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MKTQVKLISAVIAGVLHSTAFAAPQISEAPDEAKVANSVQAKQDIEVITVVGRQQHYKTD
QAHAAMRSDVSLLDTPQSVTVIPTEVMDDQMILTLGDALKNDASVSIGRVTTDRERFSLR
GFSLDESTNLLKDGHQHFSKYRLPMALVDNIEVLKGPSSLLYGQSTPGGLVNLVTKKPTY
DSFLEVSVKGDDNGSLRGMLDAGGSLNLDETIRYRAIIEKQDNNNWREYQDGSAQESDFF
VGSLMTDFDLSDSLTLSLHYDKSDEVAGQDSGALVDDQGNAIGGDETIWDMPWTKIDAQS
ENYGADISYQLTDDWNIDAGYNKQHNERERWESKPQTGSYDPDTGSYKNKPYNKLEDWQQ
ESSYFDLVGTVEVAGMQHDLLLGGNYLKHEYSSLKVKGKMDSGNIDTGVIIPQPDLDYAD
GKSQTEHYKYYGVFAQDLITFNDQWQVLVGVRYDKQKKPDADSQSVLPKLGVIYHPTDYG
SIYVNYSESFEPQGRVMDDEDANDGMELDPIKGEMYELGTKWELLSGKLRLSAALFDIKR
SNIIVNQGTSDDPITTQGGVQRHKGFELGAIGQINDDFSLITSLMYLDAEYETHDEFQGK
RPEDVPEWTASIWAKYSITDRAAFNLGAFYEGDRFGDADNTFEKSAYTRIDTGISYILPV
AGNDLQLRLKVENLFDADYLGGGENGEVNVGKPRSLKFGISYKL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccaagttaaattaatctctgccgtcatcgccggcgtcctccactcaacggca
tttgcagccccacaaatcagtgaagctcctgatgaggcaaaagtggcaaacagtgtccaa
gccaagcaagatatcgaagtgataacagtcgttggtcgccagcagcactacaaaaccgat
caggcccatgccgccatgcgctcggatgtgtcactgcttgatactccgcaatcggtaacc
gttatcccaaccgaagtcatggatgaccagatgatcctcaccttgggcgatgcactgaaa
aatgacgccagcgtctcaatcggtcgagtcaccacagacagagaaagatttagcctgcga
ggtttcagcctagacgagagtaccaacttacttaaagatggccaccagcacttctctaaa
tatcgtttacctatggcactagtagataatatcgaagtcctcaaaggtccatctagcttg
ctctatggtcagtctactcccggcggtctagtcaatcttgtgaccaagaagccaacctat
gattcatttttagaagttagcgtaaagggtgacgacaatggctcgctgcgaggcatgctc
gatgctggtggcagcttaaacctagacgaaaccatacgttatcgcgccattatcgagaag
caagacaataataactggcgtgaataccaggacggtagcgctcaagagagtgatttcttt
gtcggcagcctgatgacagatttcgacctcagtgacagcctcaccctatcacttcactat
gacaaatccgatgaagtggcgggccaagacagcggcgcccttgtcgatgaccaaggcaat
gccattggcggcgatgagactatctgggatatgccctggaccaagatcgatgctcagagc
gagaactatggtgccgatatcagctaccagctaaccgacgactggaatattgatgcgggc
tataacaagcagcataacgaacgtgagcgttgggaaagcaagccgcaaacaggtagctat
gacccagataccggcagctacaagaataaaccctataacaagctggaagattggcagcaa
gagtcctcctatttcgacttagtcggcacggtcgaagttgctggcatgcaacatgacctg
ctgctcggtggtaactatctcaagcacgaatacagctcactgaaagttaaaggcaagatg
gactcgggtaatatagataccggcgtcatcatccctcagccggatctggattatgccgat
ggcaagtcacaaacagagcattacaaatactatggcgtcttcgcccaagacttgatcacc
tttaacgatcaatggcaggtacttgttggcgtacgttatgacaagcagaaaaagccagat
gccgatagtcaatctgtgctacctaaacttggagtcatctaccacccgacagactatggc
tcaatctacgtcaactacagtgaaagcttcgagccacaaggccgagttatggatgatgag
gatgccaacgatggtatggagctagatccaatcaagggcgagatgtatgagctgggcact
aaatgggaactgctatcgggcaaacttcgcctcagcgcagcactatttgatatcaagcgc
agtaacatcatagtcaatcaaggtacatccgatgaccctattaccactcaaggtggagtc
cagcgtcataagggctttgagttaggcgccataggtcagatcaacgatgacttctcattg
atcacctcactcatgtatcttgatgcagaatatgaaacccatgatgaatttcagggtaag
cgccccgaagatgtccccgagtggacagcctctatctgggccaaatactcgatcacagat
cgcgccgccttcaacttaggtgccttctacgaaggagaccgtttcggcgacgccgataac
actttcgagaaatctgcctacacccgcatcgacactggtatcagctatatactgccagta
gccggaaacgacctgcagctaagactgaaagtcgagaacctattcgatgcagactactta
ggtggcggcgaaaacggtgaagtgaatgtaggtaagccaagaagcctgaagtttgggatt
agctataagctttag
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