Shewanella violacea: SVI_3227
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Entry
SVI_3227 CDS
T01206
Name
(GenBank) sensory box protein
Organism
svo
Shewanella violacea
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
5TM-5TMR_LYT
PAS_9
PAS
PAS_8
PAS_4
Motif
Other DBs
NCBI-ProteinID:
BAJ03198
UniProt:
D4ZB03
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Position
complement(3653744..3656800)
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AA seq
1018 aa
AA seq
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MDSEVIYSLVQNAALLLAMVFVYDAVPRKQQNEYFFIWRLSVGAVIGGITIMTMMTPWEY
QTGVFFDTRSVILAISGLFFGALPTFIAVSIAAVYRLMEGGIAVWAGLGVIISSGLFGSL
WRYKRKAAIADLSYKELYLFGFILNLLSLSWMFILPFDMAINILMQLSLPVLLIFPVATT
LLGLLLSRRLEIERDAKIQLQDDFMFRSQFNIGNIGIGISTVDQHWVKVNPRVCQMLKYT
QAELLTKTWVEMTHFEDLQTDLLQFERMLQGEIDEYEMDKRFVAKDGSIVYTHLTVACQR
VNAKVQLVISGLLDITSQKQAESAMRSSQEQLALVLSSSELGLWDWDIKTNKVDRNERCA
ELLGCSVYEIQHNERIWINGIHPQDRVAVLHSVDAHLKGDTVQHSIEYRLVALSGETRWI
LDSGKVVSRDAKGVPLRMCGTHTDITDRKRVEESLKLAASVYNNSSEAMSVQDRQGKIIT
INSAFSEITGYLENEVIDQHIDILRCERTNKTQFEQMSLQIIETGKWQGEIWLKHKNATE
YIVWLTINTIYDSRGEVYRRVALFSDITEKKQAEHIIWKQANYDPLTGLPNRRMLLEYLG
TELLKSDRNKQHLALMFLDLDYFKEVNDTLGHDVGDLLLVETAKRLKSCIRESDVVARLG
GDEFTLVLSAIDDHKGVDRVAANILTRLSEPFNLGNDTAFISASIGITLYPDDASSIESL
LKHADQAMYAAKDLGRNRFHYFTASMQEEARYRMILIRDLRQAVNNKEFEIFYQPIIDLP
NGEIHKAEALIRWHHPERGLVSPGEFIPVAEETGLIIEIGNWVFSQAAKQCAHWRDKYGV
ELQISINKSPVQFRDEGDSFEDWIVQLKELKLASNSICVEITEGLLLDASMGVSEKLLAY
RDAGIQVSLDDFGTGYSSLAYLKKFDIDYLKIDQSFTRNLESDTDDVTLCEAIIVMAHKL
GMTVIAEGVETEYQRDILTKAGCDYGQGYLFSRPIPAADFEDKYIRAIAQMKHEQASS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaagtaatttattccctggtacagaatgccgcgttactgctagccatggtg
tttgtctatgatgcagtgcctagaaagcagcagaatgaatatttcttcatatggcgatta
tcggtgggagccgtcataggtgggatcaccattatgactatgatgactccttgggagtat
caaacaggtgtatttttcgatacccgctctgtcattttagctatttctggtctgtttttt
ggtgctcttcctacctttatcgccgtcagtatcgcggctgtttatcgactcatggaggga
ggcattgctgtttgggctggacttggggtcatcatatcatctgggctatttggcagctta
tggcgttataagcgtaaggcggcgattgccgatcttagttataaagagctctatttgttt
ggctttattctcaacctgctcagcttaagttggatgtttatactgccatttgatatggca
attaatattctgatgcagctgagtctgcctgtattattgatttttcctgttgccacgact
ttactcggcttactcctgagcagaagactggagatagagcgagatgccaaaatacagctg
caagatgactttatgtttcgctcgcagtttaatatcggcaatattggaatcggcatttct
accgtagatcagcattgggtaaaagtgaaccctagggtatgtcagatgctgaaatatacc
caggctgagttgttgaccaaaacctgggtggagatgacacattttgaagatctgcaaaca
gatttacttcagtttgaacgcatgttgcaaggtgagattgatgagtatgagatggacaag
cgtttcgtcgctaaagacggcagcatagtctatacccatctgacggtagcttgccaaaga
gtcaatgctaaggtgcagttggttatttcaggcttgttggatattacctctcagaagcaa
gccgaatcggcaatgcgttcgagtcaggagcagcttgcattagtgctcagtagtagtgaa
ttaggcttatgggattgggacataaagaccaataaagtcgaccggaatgagcgatgtgcc
gagctactaggttgtagtgtctacgagattcagcacaacgagagaatctggataaacggc
atacacccacaggatagggtggctgtgctgcactcagttgatgctcatctaaaaggggat
acagtccaacatagtatcgagtaccgactggtggcgctttcgggagagactcgctggata
ttagacagtggcaaggttgtcagcagagatgccaaaggggtccccctgcgtatgtgtggt
acccatacggacattaccgatagaaaacgcgtcgaggagtcgttaaagctagcggcttct
gtttacaacaattccagcgaagccatgagtgtgcaagaccgtcagggtaaaataatcacc
atcaattcggcattttctgagataacaggttatctcgaaaatgaggtcatcgaccaacat
attgatattttgcgctgtgaaaggaccaataaaactcagttcgagcagatgagcttacaa
ataatagagaccggaaagtggcaaggagagatctggctaaaacataagaatgccactgaa
tatatcgtctggttaaccatcaataccatctatgacagccgaggcgaagtctatcgacgc
gtcgcgctcttctccgatatcacagaaaaaaaacaagccgagcacatcatctggaagcag
gctaattatgatcctctgactggactgcctaatcgccgcatgttgttggaatatctgggc
actgagttgcttaagtctgatcgtaataagcaacacttggccttgatgtttctagacctg
gattattttaaggaggttaacgataccttaggccatgatgtgggtgatctgttattggtt
gaaacggccaagcgattgaaaagctgtatacgtgaatccgatgttgttgccagattagga
ggtgatgagtttactttagtgctttcggccatcgacgatcataaaggtgtcgatagggta
gcggctaatattctaacccgtttatctgaaccctttaatctgggaaatgacacagccttc
atcagtgccagtattggtatcaccctatatcccgatgatgcttcgagcatagagagttta
cttaaacatgccgatcaggccatgtatgcggctaaagatctcgggagaaatcgtttccat
tactttacggcttcgatgcaggaagaagcgcgttatcggatgatattgatccgtgattta
cgccaagccgtaaataacaaagaatttgagattttttatcagcccattatcgacctgcct
aacggagagatccataaggccgaggcacttattcgttggcatcatcccgaaagaggcttg
gtatctcctggcgagtttatcccagttgccgaagagacggggcttattatagagataggt
aattgggtgttttcacaagcggcaaaacagtgtgcacattggcgtgacaagtatggtgta
gagctgcagatcagtatcaataagtctcccgtacagtttagagacgagggagatagtttt
gaagactggatcgtgcaattaaaggagctaaagcttgcgagtaacagtatctgcgtcgag
atcaccgaaggtttattactggatgcaagcatgggggtatcggagaagttattagcctat
cgtgacgcgggaatacaagtttcactggatgattttggtacaggttattcttcactggct
tacttgaaaaagtttgacatagattatcttaaaattgatcagtctttcacccgtaattta
gaatctgataccgatgatgtgacactatgcgaggcgattatcgtcatggcacataagtta
ggcatgacggttatagccgaaggcgtcgaaaccgagtaccagagagatatcttaactaag
gccggttgtgactatggtcaaggttatcttttctctagacccatcccagctgccgatttt
gaagataaatatatccgcgctatcgcacagatgaaacatgaacaggcatcgtcgtag
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