Shewanella violacea: SVI_3268
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Entry
SVI_3268 CDS
T01206
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svo03400
]
SVI_3268 (radA)
DNA repair and recombination proteins [BR:
svo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SVI_3268 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
Lon_C
Rad51
SLFN-g3_helicase
GvpD_P-loop
nSTAND3
AAA_18
AAA_14
NPHP3_N
cobW
DUF7125
RecA
ABC_tran
AAA_19
AAA_30
NACHT
AAA_16
CobU
MMR_HSR1
AAA_11
AAA
TsaE
AAA_24
HypA
Motif
Other DBs
NCBI-ProteinID:
BAJ03239
UniProt:
D4ZB44
LinkDB
All DBs
Position
complement(3703248..3704621)
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AA seq
457 aa
AA seq
DB search
MAKNKTAFVCNECGQDFPRWQGQCSACNEWNTVTEVRLGSIKSAGSSVSGYAGAVGGGSK
KLSEIKEVEAEKMLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTLLSDLVSRMSQLMP
SLYCTAEESLSQFKNRVNRLKLSFNEDNLYLMAETSVEAIIAELDAKQIKFAVIDSIQAV
VTDFANGSPGSPSQVKSSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH
LECNDGQIRTLRANKNRFGDVDTVGIFKMSERGMLSVDNPSEIFLSGSTTESPGAAITCI
RKGNRNLLLEIQCLTTETEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKIFHDTYFNLVG
GLKIDESETCIDLALVTALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQH
GFTEIYIPYRNYHKSMEGLGAKIYPVKTIHDFLELIN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataaaacagcatttgtatgtaatgagtgtggtcaggattttccacgttgg
caaggacagtgtagcgcctgtaatgagtggaatacagttacagaagtacgcttagggtca
atcaagtcggcgggttcttctgtgtctggttatgcgggtgccgttggcggtggttcgaag
aaacttagcgagattaaagaagtcgaagccgagaagatgctcactggcattggtgaactc
gaccgggtcttgtgtggtggtttaaccacaggctctgtgaatataatttcaggcgatccc
ggagcaggcaagaccaccttgttatctgatctcgtatcgcgcatgtcacaactgatgcca
tcgctatactgtaccgctgaagagtccttgtcacagtttaagaatcgtgtgaatcgcctt
aagttaagctttaatgaagataatttatacctgatggcggaaacgagtgttgaggccatc
attgccgagctagatgccaagcagattaaatttgccgttatcgactcgattcaagctgtg
gtaacagatttcgccaatggcagtcccgggtctccctctcaagtgaagagcagtgcacag
gcactgactcaatactgtaagcaaaataacgtcaccatgttcctcgtggcccacgtgaat
aaaaataatgaaactgccggcccgcagacattgatccatatcgtcgattgtctcactcac
ctggagtgtaacgatggtcaaattcgtactcttagagccaataagaaccgcttcggtgat
gtggataccgtaggtatcttcaaaatgtcggagcgaggtatgctcagtgtcgataaccca
agcgaaatcttcctctccgggtcgacaacggaatcacccggggcggcgatcacctgtatt
cgtaagggtaatcgtaacttgttgctggagatccagtgcttaaccacggaaactgaaggt
gaatttccacagcgagtctgtgtcggtctcaatatgaaccggattaagatgctcacaggc
atattgcgtaaacacacgcgaactaagatttttcacgacacttatttcaatttagtcggc
ggtcttaaaatcgatgagtctgaaacctgtatcgacttggccttagtcaccgccttactc
agtagcttgaatgattttgtggtgccaagaaccacttgcatcatgggtgagctgagcttg
aatggcgatgtgcgtcctatagacagcggtgtacctagagtgaaagaagcggtgcagcat
ggctttaccgagatctatattccgtaccgcaactatcacaagtcgatggaagggcttggg
gctaagatttatccggtgaagactatccatgactttctagagttaataaattaa
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