Shewanella violacea: SVI_3277
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Entry
SVI_3277 CDS
T01206
Symbol
deoA
Name
(GenBank) thymidine phosphorylase
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
svo
Shewanella violacea
Pathway
svo00240
Pyrimidine metabolism
svo01100
Metabolic pathways
svo01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SVI_3277 (deoA)
Enzymes [BR:
svo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
SVI_3277 (deoA)
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GFIT
Motif
Pfam:
Glycos_transf_3
PYNP_C
Glycos_trans_3N
DUF7204
Motif
Other DBs
NCBI-ProteinID:
BAJ03248
UniProt:
D4ZB53
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All DBs
Position
complement(3714033..3715364)
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AA seq
443 aa
AA seq
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MFLAQEIIRKKRNAEALSKEEIQFFVKGITDNTVSEGQIAAFGMAVYFNDMSMDERIALT
TCMRDSGTVLDWRSLDLNGPIIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHT
GGTLDKFDAIPGYQTEPDSALFRKVVKEAGVAIIGQTGDLVPADKRFYSIRDNTATVESI
SLITASILSKKLAAGLDALAMDVKVGSGAFMPTYEASEELARSITAVANGAGTKTTALLT
DMNQVLASCAGNAVEVKEAVDFLTGKYRNPRLYEVTMGLCAEMLQLGGLAENEAQARDKL
NTVLDNGKAAEIFGRMISGLGGPTDFIENPGLYLPESNIVRPVYAEQAGFASAMDTRELG
MAVVTLGGGRRKPGDALDYSVGLTQVCALGDEITKDKPIAMIHAQSESAFEEASSAVRNA
IQVTETRSEKTPEIYRYIRAEDL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttctagcacaagagataattcgtaaaaaacgcaacgcagaagccttgtctaaagaa
gagatccagtttttcgtcaaaggcatcacagataataccgtttcagaaggccaaattgcg
gcctttggtatggcagtttacttcaacgacatgagcatggatgagcgtatcgcgctgacc
acatgtatgcgtgactctggcacagtactcgactggcggagtttggatcttaacggtcct
atcatagataagcacagtacgggtggcgtcggtgacgttatcagcttgatgcttggccca
atggctgccgcttgcggtggttatgtgccaatgatatcgggtcgtggtctgggtcatacc
ggcggtaccttagataagtttgatgccatcccaggttatcaaactgagccagatagcgcc
ctgttccgaaaagtggttaaagaggcgggtgtagccatcataggccaaaccggcgatctg
gttccagccgataagcgcttttactccattcgtgacaatactgccactgtcgagtcaatt
tcactgattaccgcttctatactgtccaagaaattggcagcaggtttagatgctctggct
atggacgtcaaagtaggtagtggtgcatttatgccgacctatgaagcatctgaagagtta
gcacgtagcattaccgcagtggctaacggtgctggaactaagacaactgcattacttaca
gacatgaatcaggtcttggcttcatgtgcgggtaatgccgtcgaggtgaaagaggcggtt
gatttccttacggggaaatatcgcaacccacgactttatgaagtcaccatgggcttatgt
gccgaaatgctgcaactcggtgggctagccgagaatgaagcgcaagcgagagataaactc
aataccgtgctcgataacggtaaagcggcagaaatttttggccgcatgatctcgggcctg
ggtggtccaacggactttatcgaaaatccaggtctgtatctgcccgagtctaatatagtt
cgtccggtttatgccgagcaagccggtttcgcatcggccatggatactcgagagctaggt
atggctgtggtcactttaggtggtggacgccgcaaacccggtgatgcactagattacagc
gtgggtctgactcaggtctgcgccttaggcgatgagatcactaaagataagcctattgcc
atgatccacgctcagtctgagagcgctttcgaagaagcgtcttcagcagttagaaatgca
attcaggtcactgagactcgttccgagaagacgcctgaaatttatcgttatatacgcgcc
gaagatctgtaa
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