Shewanella violacea: SVI_3278
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Entry
SVI_3278 CDS
T01206
Symbol
deoC
Name
(GenBank) deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
svo
Shewanella violacea
Pathway
svo00030
Pentose phosphate pathway
svo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
SVI_3278 (deoC)
Enzymes [BR:
svo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
SVI_3278 (deoC)
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Ortholog
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GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
BAJ03249
UniProt:
D4ZB54
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All DBs
Position
complement(3715566..3716339)
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AA seq
257 aa
AA seq
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MSDLKQAAQKAIELMDLTTLNDDDTDQKVIELCHKAVTPAGNTAAICIYPRFIPIARKTL
NDMGAESVRIATVTNFPHGNDDIAIAVLETRAAVAYGADEVDVVFPYRALMEGNETVGFE
LVKACKEACGEDVLLKVIIESGVLQDPALIRKASELCIDAGADFIKTSTGKVAVNATLEA
AEIMMTVISEKNTKVGFKPAGGVRDAAAAKEFLGLAARLLGDDWATPRTFRFGASSLLVN
LLHTLELGEAAKGKQGY
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttaaaacaagctgcacaaaaagccattgagttaatggatctgactacccta
aatgacgacgataccgatcagaaagtgatcgagctttgtcataaggccgtgactccggct
ggcaacactgccgccatctgtatttatccgcgttttattcccattgcccgtaagacactg
aacgatatgggcgccgaaagcgtgcgtatcgcgacagtcactaacttcccccacggcaat
gatgatatagccatcgcagtattagagactcgtgcagccgttgcttacggagccgatgaa
gtcgatgtggttttcccataccgcgcgctgatggaaggcaacgaaactgttggtttcgag
ttagttaaagcctgtaaagaagcctgtggtgaagatgtactgctaaaagttatcatcgag
tctggcgtgcttcaagacccagctcttatccgtaaggcgtcagagctttgtatcgatgct
ggtgccgatttcattaagacatcaaccggtaaagttgccgttaatgccactctagaagcg
gctgaaattatgatgactgtgatcagtgagaagaacaccaaagtaggtttcaagcctgca
ggtggtgtccgtgatgctgctgctgcgaaagagtttttaggcctagctgctcgtcttctt
ggtgatgactgggctaccccacgcaccttccgtttcggtgcctctagcctactggttaac
ttgctgcacaccttagagcttggcgaagctgctaaaggtaaacagggctactag
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