Shewanella violacea: SVI_3290
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Entry
SVI_3290 CDS
T01206
Symbol
nusA
Name
(GenBank) N utilization substance protein A
KO
K02600
transcription termination/antitermination protein NusA
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svo03021
]
SVI_3290 (nusA)
03009 Ribosome biogenesis [BR:
svo03009
]
SVI_3290 (nusA)
Transcription machinery [BR:
svo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SVI_3290 (nusA)
Ribosome biogenesis [BR:
svo03009
]
Prokaryotic type
rRNA transcription factors
SVI_3290 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
DUF2187
KH_NusA_C
S1
Glyoxalase_4
KH_KhpA-B
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BAJ03261
UniProt:
D4ZB66
LinkDB
All DBs
Position
complement(3732572..3734071)
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKGVPREKIFEALEIALATATKKKHVGEIEVRVEIDRKTGAYETFR
RWQVVEDTGEPLENPYGEITLEAAQYENAELQVGDFVEDDMESVTFDRITTQTAKQVIVQ
KVREAERAQVVEQFQDREGELITGIVKKSNRESVVVDLGGNADAVLFKEDLISRENFRPG
DRIRALLFSVRPEARGAQLFMTRTQPDMLIELFRVEVPEIADEMIEIMGAARDPGSRAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELNGERVDIVLWDDNPAQFVINAMAPADVASI
VVDEDTHSMDIAVEADSLAQAIGRNGQNVRLATQLSGWVLNVMTVEDLQAKHQAESAKVV
SLFVSSLDVDEDFAQILADEGFTSLEEVAYVPSAELMEIDGFDEDTVEALRERAKAAIST
RALATEEALDGAEPSEDLLALEGLEKHLAFVFASKGVITLEDLAEQGIDDLIDIEELTEE
KAGELIMAARNICWFGDEE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaggcggtttcaaatgagaaaggtgttcctcgc
gagaagattttcgaagcgctggaaattgctttagccacagcaacaaaaaagaagcacgta
ggtgagatcgaagttcgcgtcgaaatcgatcgtaaaactggtgcctatgaaactttccgt
cgctggcaagttgtagaagatacaggtgaaccattagagaacccttacggtgaaataaca
ctagaagcggctcaatatgaaaatgcagaactccaagtcggcgattttgtcgaagatgac
atggagtcagtcacgttcgaccgtatcacgacacagacagccaaacaggttatcgtacag
aaggtacgtgaagctgagcgtgctcaagttgttgagcagtttcaggaccgtgaaggtgag
ttgatcaccggcatagtgaagaagagtaaccgtgagagtgtggttgtcgatcttggtggt
aatgctgatgcagtactattcaaggaagacctcatttcacgtgaaaacttccgtcctgga
gatagaattcgtgccttactcttctcggttcgccctgaagctcgcggtgctcagctattt
atgactcgtactcagccggatatgcttattgagctatttcgtgtagaagtaccggaaatt
gccgatgagatgattgagatcatgggcgctgctcgtgatccaggctcacgagctaagatt
gctgttaagtcaaatgatcgtagaatcgaccctatcggtgcctgtgtaggtatgcgtggt
gctcgagttcaggccgtatctaatgagcttaacggtgagcgtgtagatatcgtgctgtgg
gatgataatccagctcagtttgttatcaatgctatggctccagctgatgtggcttctatc
gtcgtcgatgaagatacccattctatggatatcgcagtagaagcagatagcttagctcag
gccattggccgtaatggtcagaacgtccgtctagctactcaactatcaggttgggtgttg
aatgttatgactgtagaagatctacaggccaaacatcaggctgaaagtgcaaaagttgtg
agtctatttgtttcatcattagatgttgatgaagattttgctcagatactagcagacgaa
ggatttacttcattggaagaggtggcttatgtgccatctgctgagctgatggagatcgat
ggtttcgatgaagatactgtcgaagcactgagagaacgtgctaaagcagcaatctcgact
cgtgcattggcaacagaagaagcactagatggtgcagaaccaagtgaagatcttcttgca
ctggaaggactggaaaaacatctagctttcgtttttgcaagtaaaggcgtgatcacactt
gaagatttagccgagcaaggcattgatgacttgatcgatattgaagaattgacagaagag
aaggctggtgagctcatcatggcagcccgtaatatctgttggtttggcgacgaagaataa
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