Shewanella violacea: SVI_3305
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Entry
SVI_3305 CDS
T01206
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
svo
Shewanella violacea
Pathway
svo00220
Arginine biosynthesis
svo00240
Pyrimidine metabolism
svo00250
Alanine, aspartate and glutamate metabolism
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
svo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SVI_3305 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SVI_3305 (carB)
00220 Arginine biosynthesis
SVI_3305 (carB)
Enzymes [BR:
svo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SVI_3305 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BAJ03276
UniProt:
D4ZB81
LinkDB
All DBs
Position
complement(3749750..3752968)
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AA seq
1072 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELESKGVLKEFNVEMIGATA
DAIDKAEDRGRFDKAMKAIGLECPRAGFAHTMAEAFAVQETLGFPCIIRPSFTMGGSGGG
IAYNIEEFEEICTQGLDLSPTSELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GVHTGDSITVAPAQTLTDKEYQLMRNASIAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELNNDITGGSTPASFEPAIDYVVTKMP
RFNFEKFAGANDRLTTQMKSVGEVMSIGRTFQESLQKALRGLEVGKNGLDPIIDIESADA
MKRIRHELTEPGADRIWYIADAFRAGLSIDDIFEMTNVDPWFLVQIQDLLNFETQVKDSG
MSGLNEVFLRQLKRKGFSDLRLSDLLGVNEAEVRKLRHKLEIHPVYKRVDTCAAEFSTDT
AYMYSTYEEECEANPSNRDKIMILGGGPNRIGQGIEFDYCCVHAAMALREDGYETIMVNC
NPETVSTDYDTSDRLYFESVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVPI
IGTSPDAIDRAEDRERFQKAIQRLEMKQPENETVTTVESAIISAERIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNSSPVLLDRFLDNAIEIDIDAICDGETVVIGSIMEH
IEQAGVHSGDSGCSLPPYSLSEDVQNRMREQVGKLAIELGVIGLMNVQFAVKDDEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKSQNFTKEVIPPYFSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGIGDTFAEAYAKAQLGATAAVPKSGRALLSVRDSDKQRVAELA
SNLIALGYEIDATHGTAVVLGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTTEGRQ
AIEDSRQLRRGALRYKVDYTTTLNAAFATCMAHAADDRSTVTSIQELHKRIK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaaaagtattcttatcctgggtgcgggtccgatcgttatc
ggtcaggcatgtgagtttgattactccggtgcccaggcgtgtaaagcgcttcgtgaagaa
ggttatcgagttattcttgttaactctaaccctgccacgataatgacagatccagagatg
gccgatgcgacctatatcgagccaattcattgggaagttgttcgtaacattatcgctaaa
gagcgtcctgatgcgattctgcctaccatgggtggccagacggcgcttaactgtgcactg
gagctggaaagcaagggtgtgctgaaagagtttaatgtcgagatgattggcgcaacagcc
gatgctatcgataaagccgaagaccgtggtcgtttcgataaggcgatgaaagccatcggc
cttgagtgtccacgtgcgggttttgcccatacgatggcagaggcattcgcggtgcaggaa
acattgggctttccgtgtattattcgcccgtctttcaccatgggtggcagcggcggcggt
attgcttataacatcgaagaattcgaagagatctgtactcaaggattggacctgtcgcca
accagcgagctgctaatcgatgagtcgcttatcggttggaaagagtacgagatggaagtg
gtgcgtgacaagaatgataactgcatcatagtctgctctatcgagaacttcgatgccatg
ggcgtgcacacaggcgactcgatcactgtggctccagctcagacactgacggataaagaa
tatcagttgatgcgtaatgcttcgattgcggttctgcgtgaaatcggtgtggagacaggc
ggttctaacgtacagttcggcatcaatccgaaagatggccgcatggttatcatcgagatg
aacccaagagtatcacgctcttcagcattagcgtctaaggcgacgggcttcccgattgct
aaaatcgccgctaagctggcagttggttacacgctcgatgagcttaataatgacatcaca
ggcggtagtacccctgcttcattcgagccagctatcgattatgtggttaccaaaatgcca
cgtttcaacttcgagaagtttgccggtgcaaatgaccgtctaaccactcagatgaagtcg
gttggtgaagtgatgtccattggccgtacgttccaggaatcactgcaaaaagcattgcgt
ggactcgaagtcggtaagaatggcctagatccaattatcgatatcgaaagtgccgatgcg
atgaaaagaattcgccacgagctcactgagcctggcgcagacagaatttggtatattgcc
gatgccttccgcgccggtctttctatcgatgatatcttcgagatgactaatgtcgaccct
tggttcctagtacagatacaagatctgcttaattttgaaactcaggttaaagactctggc
atgtcaggtctgaatgaagtcttcttacgccagcttaagcgtaaaggcttctctgattta
cgtttgtcagatctgcttggtgtcaatgaggcagaagttcgcaagttacgtcataagctt
gagattcatcctgtgtataagcgcgtcgatacttgcgccgccgagttctcgaccgatacc
gcttatatgtactctacctatgaggaagagtgtgaggcgaatccatctaatcgtgacaag
atcatgatcttaggtggcggaccaaacagaattggccagggaatcgagttcgattattgt
tgtgttcatgcggctatggcgttgcgtgaagacggttatgagaccatcatggtcaactgt
aaccctgagacagtatcaacggattacgacacgtcagacagactttattttgaatctgtc
actctggaagatgtgctcgagattgttcgtatcgagaagcctaagggcgttatcgtgcag
tatggtggtcaaacaccgcttaagttagctcgtgaactcgaagctgccggcgtacctata
atcggtactagcccggatgctattgaccgcgccgaagacagagagcgtttccagaaggcg
attcagcgtctggagatgaaacagcctgaaaacgagacggtcacgactgtcgaaagtgcc
attatctcggctgagcgtatcggttatcccctagtggttcgtccatcttatgtacttggt
ggtcgtgcgatggagatagtctacgatgagcaagatttacgtcgctacttcaacgaagcc
gtgagcgtgtcaaactcctctcctgtattgcttgaccgtttcttagataatgctatcgag
atcgatatcgatgctatctgtgatggtgagactgtggttatcggctctatcatggagcat
attgagcaggctggcgtacactcgggtgattcaggttgttcattacctccctatagtcta
agtgaagatgttcagaaccgcatgcgtgagcaggtgggtaaactggccatagaacttgga
gttattggcttgatgaatgtgcagtttgccgtgaaggatgatgagatctatatgatcgaa
gttaacccacgcgccgcacgtactgtaccatttgtctctaaggcaactggcgtaccttta
gctaagatagccgctcgtgtgatggcgggtcaaagcctaaagtcgcaaaattttaccaag
gaagtgattcctccatacttctcggtgaaagaagttgttttaccgtttaacaagttccca
ggcgtcgatcctctgctcggccctgagatgcgttctactggtgaggtgatgggtataggt
gatactttcgctgaagcatatgctaaggcacaacttggcgctacagcggccgtgcctaag
tcaggtcgtgctttgctatcggttcgtgatagcgataagcaaagggtagcggaattagct
tctaacctgattgcactgggttatgaaattgatgcaactcatggtaccgcagttgtcttg
ggtgaggctggaatcaatcctcgtctggttaacaaggtacatgaagggcgtcctcatatt
cttgaccgtatcaagaatggtgaatacacctatatcgttaacaccaccgaaggtcgtcag
gcgattgaagattctcgtcaactgcgacgcggtgcattgcgatacaaggtcgattataca
acgaccttgaatgccgcatttgcgacatgtatggcgcatgctgccgatgatagaagcact
gtgacttcgatacaagagctgcataaacgtatcaagtaa
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