Shewanella violacea: SVI_3390
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Entry
SVI_3390 CDS
T01206
Symbol
pth
Name
(GenBank) peptidyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
svo03012
]
SVI_3390 (pth)
Enzymes [BR:
svo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
SVI_3390 (pth)
Translation factors [BR:
svo03012
]
Eukaryotic type
Release factors
SVI_3390 (pth)
Prokaryotic type
SVI_3390 (pth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-ProteinID:
BAJ03361
UniProt:
D4ZBG6
LinkDB
All DBs
Position
complement(3839486..3840070)
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AA seq
194 aa
AA seq
DB search
MSNIKLIVGLANPGEKYAQTRHNAGAWYVQELARICGATLIADSKYYGLTARVSLHGKDV
RLLIPSTFMNLSGKSVGAMANFFRIQAGEILVAHDELDMPPGVAKFKLGGGHGGHNGLKD
IISSLGNDKGFHRLRIGIGHPGDRNQVSNYVLGKAPAVEQTQIEPVLDEAVRSTQILFTE
DMAKAMNRLHSFKA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacataaaactaattgtaggactcgctaatcctggtgaaaagtatgcacagacc
cgacataacgccggagcctggtatgtacaagagctagccagaatatgcggtgcgactctg
atcgccgacagcaagtattatggcttaaccgcaagagttagcctacatggtaaagatgtt
cgtttactgatcccgagtacgtttatgaatctcagtggtaagtccgtcggtgcgatggcg
aatttttttcgtattcaagctggtgagattttagtcgctcacgatgaactagatatgcca
ccaggagttgccaagtttaaactgggtggcggacatggtggtcataatggcttaaaggac
atcatttccagtctgggcaatgataaaggtttccatcgattgcgaattggcataggtcat
ccaggcgatagaaatcaggtcagtaattacgtactgggcaaggcgccggcagttgagcag
actcagattgaacctgtgctagatgaggctgtacgctccacccagatactgtttactgaa
gacatggctaaagccatgaacaggttgcacagctttaaagcatag
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