Shewanella violacea: SVI_3393
Help
Entry
SVI_3393 CDS
T01206
Symbol
miaB
Name
(GenBank) tRNA-i(6)A37 modification enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_3393 (miaB)
Enzymes [BR:
svo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SVI_3393 (miaB)
Transfer RNA biogenesis [BR:
svo03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SVI_3393 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Amdase
Motif
Other DBs
NCBI-ProteinID:
BAJ03364
UniProt:
D4ZBG9
LinkDB
All DBs
Position
3842111..3843535
Genome browser
AA seq
474 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSSKMADLMDEYKGYTLTDNAEEADVLLLNTCSIREKAQEKVF
HQLGRWKKLKDKNPNLIIGVGGCVASQEGKMIKERAKCVDIIFGPQTLHRLPEMVDQVKQ
GGKAVIDISFPEIEKFDRLPEPRADGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPVDD
VILEVAQLAEQGVREVNLLGQNVNAFRGATHDDDICTFAELLRYIADIDGIDRVRFTTSH
PIEFSQDIIDVYEDTPELVSFLHLPVQSGSDHILTQMKRGHMAIEYKSIIRRLRKARPDI
QISSDFIIGFPGESKQDFADTMKLIEDVAFDHSFSFIYSARPGTPAADLPDDVTLAEKKE
RLAILQERITQQAMRYSRQMLGTVQRILVEGPSVKNPMELRGRTETSRVVNFEADPKHIG
SFVDVEIVDVYTNSLRGTFIRGEDEMDLRRSLRPSDIVLKHKKDDELGVTQYTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaactccatataaaaacctggggctgtcagatgaatgagtatgactcatca
aagatggccgatctgatggacgaatataagggttacaccctgacagacaacgctgaagaa
gccgatgtgctgttacttaatacctgttcgatccgtgagaaggcacaggaaaaagtgttc
catcaacttgggcgctggaagaagttaaaagataaaaacccgaacctcatcataggtgtc
ggtggctgtgttgcgtctcaagaaggcaagatgatcaaagaacgtgctaaatgcgtcgat
atcatctttggcccgcagaccttgcatcgtctgcctgagatggtcgatcaggtcaaacaa
ggtggcaaggctgttatcgatatcagcttcccggaaattgagaaattcgaccgactgccc
gagcccagagccgatggcccaaccgccttcgtttctatcatggaagggtgcagtaagtat
tgttccttctgcgtggtgccatacacacgcggcgaagaggtgagtcgcccggtagatgac
gtcatcctggaagtggctcagcttgccgagcaaggtgttcgtgaagtgaatttactgggt
caaaacgttaatgcgtttcgcggcgcaacccatgacgatgacatctgtacctttgccgaa
ctgctacgttatatcgccgatatcgacggtatcgacagggttagatttaccaccagccat
cccatagaattctctcaagacattatcgatgtctatgaagatacacctgaactggttagc
ttcctgcatctgccggtacaatcgggttcggatcatattctgactcagatgaagcgtggc
catatggctatcgaatacaagtcgatcattcgtcgtctgcgtaaggcgcgtccagatatt
cagatcagctcagacttcatcataggtttccctggggaatctaagcaagatttcgccgac
accatgaagttaattgaagatgtcgctttcgatcatagctttagctttatctatagcgca
cgtccaggtacgcctgcagcagatctgccagacgatgtgactctggctgagaaaaaagag
cgcttggccatcttgcaagagcgtatcactcagcaagcgatgcgttacagtcgtcaaatg
ttgggcactgttcagcgcatcctagtcgaaggtccttcggtgaaaaaccctatggaacta
aggggccgcaccgaaaccagtcgtgtggttaacttcgaagccgatcctaaacacataggc
agcttcgtcgatgtggaaattgtcgatgtttacacaaactcactgcgtggtacctttatc
cgcggcgaagacgaaatggacctacgccgctcactaaggccttctgatattgttttgaaa
cataagaaagacgatgaattaggcgtgacacagtacacaccttaa
DBGET
integrated database retrieval system
