Shewanella violacea: SVI_3409
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Entry
SVI_3409 CDS
T01206
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
SVI_3409
Enzymes [BR:
svo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SVI_3409
Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SVI_3409
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
DUF7537
Barwin
Motif
Other DBs
NCBI-ProteinID:
BAJ03380
UniProt:
D4ZBI5
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All DBs
Position
3861816..3862613
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AA seq
265 aa
AA seq
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MLTACSSSDSLDNANSAANNSANNPNSGRYKLKNDRAPTSTPDISKVENARPKYEPYSRG
GNKSNYKVLGKTYQVLNSGKGFVQTGYASWYGSKFHGHLTSNGETYDMYSMSAAHKSLPL
PSYVRVTNLKNNKQVIVRVNDRGPFHTSRIIDLSYAAAHKLDMLKNGTAYVKIEVIYIES
PESVALAELKHTELHYIQVLASSDKSKLDKLSRELEIKYKVKTRILSANNLYKLQLGPIG
QIQIATKLNQQLKINGYPQSYLVTR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgctaacagcgtgttcaagctcagatagtctagataatgccaatagtgcagctaacaat
agtgcaaataatcccaatagcggacgctacaagcttaaaaatgacagagcaccaaccagt
acaccggacatatctaaggttgaaaacgctcgtcctaaatatgagccctatagccgtggc
ggtaacaagagtaattacaaggttttaggtaaaacgtatcaagttctaaattcaggaaaa
ggatttgtacagactggctacgcatcatggtacggctctaaatttcatggccatcttacc
tcgaatggcgaaacctatgacatgtactcaatgtcggcagcacataaatctttacctctg
ccgagttatgtcagagtgactaatctcaagaacaacaaacaggtgattgttagggttaat
gacagaggccctttccacacaagccgaatcatagatctctcctatgcggcggcccataag
ttagacatgcttaaaaatggcacagcctatgtcaaaattgaagtgatatacattgagagt
cctgagtcagtcgccttggctgaactcaaacacactgagctccactatatccaggtcctg
gcatcctctgacaagagtaagctagataaactatcgagagaactggagatcaaatacaag
gtgaagacaagaatattatctgccaataatctgtataaattacaattggggcccataggg
cagatacagatagcaactaaattgaaccaacaattgaaaatcaatggttatccccagagc
tatctggtcacacgttag
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