Shewanella violacea: SVI_3424
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Entry
SVI_3424 CDS
T01206
Symbol
clpB
Name
(GenBank) clpB protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svo03110
]
SVI_3424 (clpB)
Chaperones and folding catalysts [BR:
svo03110
]
Heat shock proteins
HSP100
SVI_3424 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_24
AAA_14
nSTAND3
TniB
AAA_7
bpMoxR
AAA_18
IstB_IS21
ATPase_2
DUF815
NBD_SMAX1
NACHT
AAA_25
AAA_19
ATP_bind_1
AAA_6
Motif
Other DBs
NCBI-ProteinID:
BAJ03395
UniProt:
D4ZBK0
LinkDB
All DBs
Position
complement(3879161..3881734)
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AA seq
857 aa
AA seq
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MRLDRMTNKFQTAISDAQSLALGRDHQFIEPIHLMMALLNQDNGSIHPLLTQAGILVSSL
RLMISQEIERLPQVDGAGGDIQLSQALIRLLNLCDKLSQKRKDKFISSELFILAALEGND
LLAQKLKKAGATKGLMEQTIKQIRAGKTIDDPNAEDQRQALKKFTVDLTELAEQGKLDPV
IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL
DMGSLVAGAKYRGEFEERLKAVLNELYQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLK
PALARGDLHCVGATTLDEYRKYIEKDAALERRFQKVLVEEPNVEDTIAILRGLKERYELH
HHVEITDPAIVAAASMSNRYVSDRKLPDKAIDLIDEAASSIRIQIDSKPEVLDKLERRSI
QLKIEEQALAKETDEASIRRLYSLRKELKDVDAKAAELNEIWHTEKAALAGTQHIKADLE
QARLNLDVARRASDLTRMSELQYGRIPALEKQLDLAAQAEMQDMTLLRHKVTDVEIAEVL
SRATGIPVAKMLEGEKEKLLNMEEALHQTVIGQNEAVDAVSNAIRRSRAGLADPERPIGS
FLFLGPTGVGKTELCKSLAKFLFDTEAAMVRIDMSEFMEKHSVARLLGAPPGYVGYEEGG
YLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GSDIIQTRCGSLSYSEMKAEVMNVVVHSFRPEFLNRIDETVVFHPLDEKHIEYIANIQIQ
ALQQRLTEKDFELIISEDALALIAKAGFDPVYGARPLKRALQQEVANPLAQRILSGSLVP
GKPIKLECSGGELVFLQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgatcgtatgaccaataaattccaaacagcgatttccgatgcccaatcactg
gcattggggcgtgatcaccagtttattgaacctatacatctgatgatggcacttctcaat
caagataatggttcaattcaccccttacttactcaggccggaattctggttagctcattg
cgtttgatgataagccaagagatagaacgtttacctcaagttgatggcgctggcggagat
attcaattatcacaggcactgatacgcctattaaatctctgtgacaaactttcccagaag
cgcaaagataaatttatttccagcgagctatttattctagctgcactggaaggtaatgat
cttcttgcccagaagctaaaaaaggcaggcgcaactaaaggtttgatggagcagaccatc
aaacagatcagagctggtaaaactattgacgatccgaatgccgaagatcaacgtcaagcg
cttaaaaagtttactgtcgatctgaccgagcttgccgagcaaggcaaactggatcctgtt
ataggtcgagacgatgagatccgtcgtacaattcaggtattgcagcgtcgtagtaaaaat
aatcctgtattaataggcgagcctggcgtgggtaaaactgcgatagtcgaagggctggca
caaagaatcgttaacggtgaagtgcctgaaggtatcaagaataagcgagtgctctcatta
gacatgggttcattagtggctggggctaaatatcgtggtgaattcgaagaacgtttaaaa
gctgttcttaatgagctttatcaagaagagggtcaagtcatcctcttcatcgatgagtta
catactatggtgggagctggaaaaggcgatggtgccatggacgcgggtaatatgcttaaa
ccagcccttgcaaggggagatcttcattgtgtcggggcgacgacattagacgagtaccgc
aaatatatagaaaaagatgccgctttagaacggcgttttcagaaggtgttggttgaagag
cccaatgtagaagacactattgctatcttacgtggactcaaggaacgctacgagttacat
caccatgttgagatcaccgaccctgcaattgtagccgcagcaagtatgtcaaatcgatat
gtctcagatcgtaagttgcccgataaagccatagatctcatcgatgaagcagcatctagt
atcagaattcagatcgactctaaaccagaagtactagataagttagagcgcagaagcatc
cagcttaaaatagaggagcaagcactcgctaaagaaactgatgaagcgagtattcgccgc
ttatattcactgcgaaaagagttgaaagatgtcgatgctaaagccgctgagcttaatgaa
atctggcatacagaaaaagcagcgcttgcaggaactcaacatataaaggcggatctagag
caggcaaggctgaatctcgatgtggcgaggcgtgctagtgatttgactcgtatgtctgaa
ttgcaatatggccgtataccagcgctagaaaagcaattagatcttgcggcgcaagccgag
atgcaagatatgactttattgaggcacaaggtaactgatgtcgaaattgcagaggtgcta
tctagagctacggggatcccagtcgctaaaatgttggaaggagagaaagagaaactgctg
aatatggaagaagccttacatcaaacggttattgggcagaatgaagccgtagatgcggtt
tcaaacgcaattcgtcgtagtagagctggccttgccgatcccgaacgccctataggatca
tttctgtttttgggaccaactggggtaggtaagaccgagttgtgtaagtctttggctaaa
tttttattcgatacagaagccgctatggtacgtatcgatatgtcagagtttatggagaag
cactcagttgcacgtttactcggtgcgcctccaggttatgtgggttatgaagagggtggc
tatttaactgaagcgataagaagaaagccgtattcggttatacttctcgacgaagttgaa
aaagctcatcctgacgtatttaacattctattgcaggtgctagatgatggtagattgact
gatggccaaggccgtactgtcgactttagaaatacggttatcatcatgacgtcaaatctt
ggctctgacatcattcaaacccgatgtggctctctgtcatacagtgagatgaaggctgag
gtcatgaatgttgtagttcatagttttagacctgaattcttaaatagaatcgatgagacc
gtagtatttcatcctctggatgagaagcacattgaatatattgctaacattcaaatccaa
gctttacagcagagacttaccgaaaaagattttgaactcattattagtgaagatgcatta
gccttgattgctaaggctggtttcgatcctgtatatggagctaggcctttgaaaagggcc
ttgcagcaggaagttgctaatccactggctcaacggattttaagcggtagcttagtgcct
ggtaagcccattaagcttgagtgttcgggaggagagttagtcttcctgcagtaa
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