Shewanella violacea: SVI_3439
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Entry
SVI_3439 CDS
T01206
Name
(GenBank) sensor histidine kinase
KO
K02476
two-component system, CitB family, sensor kinase [EC:
2.7.13.3
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
svo01001
]
SVI_3439
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
svo02022
]
SVI_3439
Enzymes [BR:
svo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SVI_3439
Protein kinases [BR:
svo01001
]
Histidine kinases
CitB family [OT]
SVI_3439
Two-component system [BR:
svo02022
]
CitB family
Unclassified
SVI_3439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_3_2
HATPase_c
SPOB_a
HATPase_c_5
PAS_8
PAS_9
PAS
HATPase_c_3
Diguanyl_cycl_sensor
PAS_4
HATPase_c_2
sCache_3_3
PAS_GdpP
Motif
Other DBs
NCBI-ProteinID:
BAJ03410
UniProt:
D4ZBL5
LinkDB
All DBs
Position
complement(3899088..3900704)
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AA seq
538 aa
AA seq
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MSIVSTFKNLGLHNRLAFFSLSLIIIQTIGLGVVSTYSLQTNLEEQIGKRALALSKSLVH
HPVIIQGLINKDSVSIQELAETIRLNTEARFIVVGDIDGIRYSHPNLSKLGQKMVGGDNA
LALVDGQSYISKATGSLGISVRGKSPVYSDTGEIIGLVSVGFLEEDIDKVVEQFKRNFHF
FFGLILLAGVGITIYIAKRYRDDIFGLEPEEIARTYTERKAVLASILEGIIVINEAGVIT
SVNPVALQLIGELDSEDIVGSSINSLSSLSPLVSTENSQLSLRDIEVDINEQLMILTKTP
LLIKGENKGAVLSFRLKDDIVALSQKLSQVEQFSTMLQVQTHEYSNKLNTIGGLIQIGSV
DEALELITSETSGYQEMIEFLIATVADPVMAGFFLGKYNQARERNIEFVIEPDSSLNDIP
VNIPSEKLVTILGNIIDNAFDACLKNSTKIHMVNLHMTDIGNDLIFEVVDSGSGIDSDLK
ENMFALGETTKSDMGHGIGMYLVKNALAQLGGSISISNAKGGGTIMTVYIPKQLAKRS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgtctcaacctttaaaaatctaggtctacataatcgtctggccttcttctcc
ttgagtctgatcataattcaaaccattggcttaggtgtggtttctacctatagtctacaa
acaaacctcgaagagcagattggtaaacgcgcccttgctctgtctaaatctttagtgcat
caccccgtcataattcagggccttatcaataaagatagcgtttcgattcaagagcttgcc
gagactattcgtcttaataccgaagctagattcatcgttgttggtgatattgacggtatt
cgttactctcatccaaatctcagcaagttaggtcagaagatggtgggtggggataatgct
ctggccttagttgatggtcagtcttatatctcaaaggcaacaggctccttaggcatctcg
gtacgtggcaagagcccggtttactcagatacgggagagattattggtttggtgtcggta
ggctttcttgaagaagatatcgacaaggttgtagaacagtttaagcgtaattttcacttc
ttctttggtttaattctcttagcgggcgtggggatcaccatttatatcgcgaaacgttat
cgggatgacattttcggactcgaaccggaagagatagcccgtacatataccgagcgtaag
gcggtgcttgcctccattcttgaaggcatcatagtgatcaatgaagcaggagtaatcact
agcgtcaatccagttgctttacagctaattggtgagcttgatagcgaggatatagtcggt
agttcaatcaacagcctatcgtccttgtcccccttggttagtaccgaaaattctcagctt
tctttgcgtgatattgaagtggatattaatgaacagttgatgatcttgaccaagacgcct
ttattgatcaagggggagaataagggcgccgtgctcagcttccgtctcaaggatgatata
gttgcactcagtcagaagctgtctcaggtggaacagttctcgaccatgctgcaagtgcag
acccatgagtactctaataagcttaataccataggtggccttattcagattggctcagtc
gatgaggctttggagctgatcaccagtgaaacctcgggttatcaggagatgatcgagttc
ttgattgcgaccgttgccgatcctgttatggcaggattttttctgggtaagtacaatcaa
gctcgggagcgtaatatcgaatttgtcatagaacctgatagcagcctcaatgatattcct
gtgaatataccgagtgagaaattggtcacgatcttggggaatatcatagataatgccttc
gatgcctgccttaaaaatagcactaaaattcacatggttaatttacatatgacagacata
ggtaatgaccttatattcgaagttgtagactcaggtagcggcatagatagcgacttgaaa
gagaatatgtttgcactaggtgaaaccactaaatcggatatgggccatggtatcggcatg
tatctggtgaagaatgcactcgctcagttaggcggatcgatatctatttctaacgccaag
ggaggcggtactatcatgaccgtgtatatccctaagcagctggccaaaagatcataa
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