Shewanella violacea: SVI_3503
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Entry
SVI_3503 CDS
T01206
Name
(GenBank) hypothetical protein
KO
K12976
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
svo
Shewanella violacea
Pathway
svo00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SVI_3503
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
svo01005
]
SVI_3503
Lipopolysaccharide biosynthesis proteins [BR:
svo01005
]
Lipid A
SVI_3503
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GFIT
Motif
Pfam:
PagL
Motif
Other DBs
NCBI-ProteinID:
BAJ03474
UniProt:
D4ZBS9
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All DBs
Position
3967739..3968287
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AA seq
182 aa
AA seq
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MNKPLHISCVFILLAFLSPSSFSGSGVTYTQGEIAPRWDGWQESHSGTAYRLAYIHNIEM
NENFLTRYNIDFNLEFAYHHWQDFLYADKNGGSVTPTLKYLLNFKHLTLYVEAGIGVTYI
NSQFYADRDMGSNWQFEDKLGIGGILFKHHQIGFSLIHYSNANFYNTNDGLNAIGFSYGY
FW
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcctttgcacatatcatgtgtttttatactcttagcatttttatcacctagc
agcttctcaggctcaggtgtgacctatactcagggcgaaatagcacccagatgggatggt
tggcaagaatcacactcgggcacggcttatcgtctcgcatacatccacaatattgaaatg
aatgaaaattttttaacccggtacaatatcgactttaatctggaatttgcctaccaccac
tggcaagactttctatatgcagataagaacggcggctctgttactcccaccctcaaatac
ctgctcaatttcaagcacctcaccctctatgtagaggctggcataggtgtcacttacatc
aacagtcaattctatgccgaccgcgacatgggctctaactggcaatttgaagataagtta
ggtatcggggggatcttgttcaaacatcatcaaattggcttttctcttatccattattcc
aatgctaacttctacaacaccaatgatggtctaaacgccatcggctttagctacggctac
ttctggtga
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