Shewanella violacea: SVI_3573
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Entry
SVI_3573 CDS
T01206
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
svo
Shewanella violacea
Pathway
svo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SVI_3573 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svo01007
]
SVI_3573 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_3573 (lysS)
Enzymes [BR:
svo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SVI_3573 (lysS)
Amino acid related enzymes [BR:
svo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SVI_3573 (lysS)
Transfer RNA biogenesis [BR:
svo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SVI_3573 (lysS)
Prokaryotic type
Other AARSs
SVI_3573 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAJ03544
UniProt:
D4ZBZ9
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All DBs
Position
complement(4043674..4045182)
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AA seq
502 aa
AA seq
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MTEQVQDENKLIAERRAKLEHIRANCPANGHPNNFDRKHKAADIQAEYGQYTKIDLEGMA
IQRSIAGRIMAKRGPFLVIQDVSGRIQAYAGKDVQKDLKAKFQGLDIGDIIGVTGQLHLS
GKGDLYVNMEDYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVV
SAIRNFMIKKEFMEVETPMMHTIPGGATARPFITHHNALDIEMYLRVAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKL
PYGEHTVDFGGPYARLSMLDAIKKYCPDNETIQSMTYEEVKDVEFMRNLAKSIGMKIEKF
WTCGQLLEEIFGETAEPHLMQPTFITGYPADISPLARRNDENHFITDRFEFFIGGREVAN
GFSELNDAEDQDQRFKAQVAAKDAGDDEAMFYDADYIRALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQAQG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaagtacaagacgaaaacaagttaattgcagagcgtcgtgccaagcttgag
cacatacgcgctaactgccctgcaaatggtcacccaaacaacttcgatcgtaaacacaaa
gcggcagatattcaggctgaatatggtcagtataccaagatagatcttgaaggcatggcg
atccaacgtagtatcgccggtcgtatcatggctaagcgtggtccattcctagttatccag
gacgttagcggacgcatccaggcttacgcgggtaaagacgttcagaaagatcttaaagcc
aagtttcagggcttagatatcggtgacattattggtgttaccggtcagctacacctgtct
ggcaagggcgacctctatgtgaacatggaagattaccaattgctgactaaagcattgcgt
ccacttcctgagaagtttcatggcctgacggatcaagagacaagatatcgccagcgttat
gttgatctaatcgtcaacgaagagtcacgtaatgctttcatcatgcgttctaaagtcgtt
tcagctatccgtaacttcatgatcaagaaagagttcatggaagttgaaacccctatgatg
cacaccatcccaggtggtgctacggcgcgtccgtttatcactcaccacaacgcactggat
atcgagatgtatctacgtgtggcacctgagctttatcttaagcgcttggttgtcggtggc
ttcgagcgtgtattcgagatcaaccgtaacttccgtaacgaaggtctatctcctcgccat
aacccagaattcactatgatggaattctatatggcctatgcagattataaagatctgatg
gacttgaccgaagagatgcttagctctattgctactgagctttgtggttctccaaagctt
ccatacggcgagcacacggtagattttggcggcccatatgcgcgtttgagcatgttggat
gccattaagaagtactgccctgacaatgaaactattcagtctatgacctatgaagaggtt
aaagacgtcgagtttatgcgtaacttggctaagagcatcggcatgaaaatcgagaagttc
tggacctgtggtcagctactcgaagagatcttcggtgaaactgccgagcctcatttgatg
cagcctaccttcatcacaggttatcctgcagatatttcgccattggcacgtcgtaacgat
gaaaaccatttcatcaccgaccgtttcgaattcttcatcggtggccgtgaagtcgctaac
ggcttctctgagcttaacgatgctgaagatcaagaccaacgtttcaaggctcaggttgcc
gcgaaagatgctggtgatgacgaagccatgttctatgatgcagattatatcagagccctc
gagcacggcttgccacctactgccggtcaaggcatcggcatagatcgtttggtgatgttg
tttaccaacacgcatacgattcgtgacgtgatcttgttcccagccatgcgccctcaagct
caaggctaa
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