Shewanella violacea: SVI_3613
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Entry
SVI_3613 CDS
T01206
Name
(GenBank) outer membrane porin, putative
KO
K14062
outer membrane protein N
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_3613
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_3613
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Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
BAJ03584
UniProt:
D4ZC39
LinkDB
All DBs
Position
complement(4093204..4094412)
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AA seq
402 aa
AA seq
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MKKTLLASALSAVIFAPSVAAIEIYKDDKNAVEIGGFVDARVINTQGATEVVNGASRINF
GFTREMSDGWKAFTKLEWGVNPFGNSEIVYSSESNFESKSGDFLNNRLGYVGIGHDKYGT
LSIGKQWGAWYDVVYNTNYGFVWDGNAAGVYTYNKADGAVNGTGRGDKVVQYRNSFGDVS
FAIQAQLKHDTFYTCEPAMGLGTDCEARWNASEESQEVNYDYTYGGSITYQATDMLTLTA
GINRGEFDVSFHTGDKITATDLIYGVGATWGGFDTEGFYAAANFNKNENHDTDNLGRLIK
DSYGIESLFSYKYDNGLRTFISYNVLDAGSDYVIQPNSADPKDVFKRQFVVVGLHYVWDS
STVLYVEARKDYSNFTSADKEQEARMSISEDDGVAIGIRYTL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacattactagcatcggctttatctgccgtcatatttgccccttcagtagcg
gccatcgaaatttataaagatgacaagaacgcagtggagattggtggattcgttgatgct
cgtgtcatcaacacccaaggagcgacagaagtcgtgaacggagcttcacgcattaacttt
ggtttcactcgcgaaatgagtgatggttggaaagcattcactaagctggagtggggtgtt
aatccattcggtaacagtgagattgtgtatagcagtgaaagtaatttcgagtctaagagc
ggagactttttaaataatcgtcttggttatgtcggtattggtcacgacaaatacggtaca
ttaagcataggtaaacagtggggcgcttggtatgacgtcgtttataacaccaactatggc
ttcgtctgggatggtaacgccgcaggtgtctatacctataacaaggccgatggtgcagta
aatggtacgggtcgtggcgataaagtcgttcaataccgtaatagttttggtgatgtgagt
ttcgcaattcaagctcaacttaagcatgacaccttctatacctgtgagccagcaatgggc
ctgggcacagattgtgaagcacgttggaatgctagtgaagagtcccaagaggtgaattat
gattacacctacggtggttctatcacatatcaggcaacagatatgcttacattaaccgca
ggtattaatcgcggtgagtttgacgtgagttttcataccggtgataaaattactgcaacc
gatcttatttatggggttggtgctacctggggcggcttcgatactgaaggtttctatgcc
gctgccaacttcaataagaatgaaaaccacgatacagataacttaggccgtcttatcaag
gactcttacggtatcgagtctttgttctcatataaatatgataacggtctacgtacattc
atctcttataacgtcttagatgcgggtagcgattatgttattcagccaaatagcgcagat
cctaaggatgtatttaagcgtcagttcgttgtagttggcctgcactatgtttgggattcg
agcacggttctgtatgtcgaagcacgtaaagattacagcaactttaccagtgcagataag
gaacaagaggctagaatgtctatttcagaagatgatggcgtagccataggtatcagatac
actctgtag
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