Shewanella violacea: SVI_3615
Help
Entry
SVI_3615 CDS
T01206
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
svo
Shewanella violacea
Pathway
svo00550
Peptidoglycan biosynthesis
svo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SVI_3615 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svo01003
]
SVI_3615 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
SVI_3615 (mrcB)
Enzymes [BR:
svo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SVI_3615 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SVI_3615 (mrcB)
Glycosyltransferases [BR:
svo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SVI_3615 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SVI_3615 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BAJ03586
UniProt:
D4ZC41
LinkDB
All DBs
Position
complement(4095073..4097415)
Genome browser
AA seq
780 aa
AA seq
DB search
MTKKVVSKQGAKKAPSKAKPRKKSSAKKVSPGWKRKVWSISWKLGVIAIAAVSIYSIYLD
QIIARKFEGQKWHLPAQVFSRSMALYPGAAVSHSQLISELKLLGYRKVSNPRQVGEFSAS
RTRVDLWRRPFLHPQGDQAEQRVMISFDSQGVDSVVRTEDHRQLAVFHLEPVLLDRIITG
DGEDRLFVKAAKMPPAIIEALILVEDRSFYEHHGVNPLAILRALMVNISAGRTVQGGSTL
TQQLAKNFFLSSKRSLVRKAREALMALIIDFRYGKDEILEAYLNEVYMGQDKARGVHGMG
LASQFYFGRPIAELTLSQQAFLVAVIKGPSYYNPWRYPERVQERRDLVLRLLMEGEKISV
AQYKAAAESPLGLRKSDRPVHQKLPAFFAVVKHELARRFGDTLLKQSGIKVYTTLDPMAQ
EAAEKSVKKVMARLGKNIKQLQVGMVLTDKASAGIAAMVGDKSPGYKGYNRAVEIRRPIG
SLIKPFVYGTALMQGDKYNLATPLKDRPITLKNGQGKTWSPQNVTRKFSGEVPLLTGLKK
SMNVPTVNLGMAIGVSSVATTLDKAGWREPISEYPSMLLGAVNGSPLMVAQVYQTIADHG
RYRRLSSITAVLDKDNNPLPVSNIPQSQAMDPATNFLVQYAMTQVVQSGTATRLGKAFPG
KVLAGKTGTSNDSRDSWFAGFDERNVAAIWVGRDDNGKTGLYGSNGAMAVYQNFLENRPP
ISLRRTPVNGVVNAHFDRTTGKAMEAGCANTIALPALAASYHPAINCGEPLSWWQKLTGG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaagtagtatctaaacaaggtgccaagaaagcaccatctaaagctaagccg
cgtaaaaagtcttcagctaaaaaagtatcccctggttggaagcgtaaagtctggtctatc
agctggaagctaggtgttattgccatagctgcagtgtctatttacagcatctatctggat
caaatcatagcgcggaaattcgaagggcagaaatggcaccttcccgctcaggtattcagt
cgctccatggccctttatcccggcgccgcagtcagtcatagccaattgatctctgaactt
aagttacttggttatcgtaaggtttctaaccccagacaggtgggtgagttttccgcttct
aggactagagtcgatctctggcgtaggccttttctgcatcctcaaggggatcaggcggag
cagagagtgatgataagcttcgactctcaaggtgtggattcagttgtcagaactgaagat
catcgtcaactggcagtgtttcatctcgaacctgtattactggatcgcatcatcacaggt
gatggtgaagacaggctgtttgtgaaagccgctaagatgccgccagcgattatcgaagcc
ctgattctagtggaagacagaagcttctacgaacaccacggcgtgaatcctttagctatt
ctccgagccttgatggttaacataagcgctggaagaactgtgcaagggggctcgacactg
acccagcagctggctaaaaacttcttcctgtccagcaagcgctcactggtgcgtaaggcc
cgtgaagccttgatggccctgatcatagattttcgttacggcaaagatgagatcttagaa
gcgtatctcaatgaagtgtacatgggtcaagataaggcccgtggcgtacacggcatgggg
ctagcgtctcagttttattttggtcgtcctatcgccgaattgactctgtcccaacaagcc
ttcttagtggccgtgattaagggaccttcttattacaatccttggcgttatcctgagcga
gttcaggagcgcagagatctggtgctgagactcttaatggaaggtgagaaaatctctgtg
gctcaatacaaggcggccgccgagtctcctcttggattgagaaaatcagatagacccgtg
catcaaaagttacccgccttctttgccgtggtgaaacacgaactggcgagacgattcgga
gataccttactcaagcagtcgggaattaaggtttacaccacactggatcctatggctcaa
gaagcggctgaaaaatcggtcaagaaggtgatggctcgactgggtaagaatattaagcag
cttcaggtaggcatggtgctgaccgataaggcttctgctggcattgctgccatggtggga
gataagtctcctggctacaagggctataaccgcgccgttgaaatacgtcgtcctataggt
tccctgataaagccttttgtctatggtactgcgcttatgcaaggtgataaatataacctg
gcgacgccactgaaagatcggcctattaccttgaaaaatggtcagggtaaaacctggtcg
ccacagaatgtaaccagaaagtttagcggtgaagtccccttacttacgggtttgaagaag
tcgatgaatgtgcctacggtaaacttgggcatggccataggagtcagtagtgtggcgaca
accttagacaaggcggggtggagggagcctatctctgagtatccttctatgctgcttggg
gcggttaatggatcgcccttgatggtggctcaggtttatcaaaccattgccgatcatggt
cgataccgtcgactatcttccatcacagcggttttagacaaggacaataatccactgcct
gtatcaaatattcctcagagtcaggcgatggaccccgcgacaaacttcttggtgcaatat
gccatgactcaagtggtgcaatcaggcactgcaactcgtcttggtaaggccttcccaggg
aaagttttagcgggtaagacaggtaccagtaacgactctcgcgactcttggtttgccggt
ttcgatgaacgtaatgtggcggcaatttgggttggacgagacgataacggtaagactggc
ctttacggcagtaacggcgccatggccgtctaccaaaactttctcgaaaatcgtccgccg
atcagcttaagacgtacccctgtcaatggcgtggtgaatgcacacttcgacagaaccaca
ggtaaggccatggaagcaggctgtgcaaacaccatagcactgcccgcattggctgcaagc
tatcatcctgccataaactgtggtgaacccttgtcttggtggcagaagctaactggtggt
tga
DBGET
integrated database retrieval system
